Pairwise Alignments

Query, 631 a.a., no description from Variovorax sp. SCN45

Subject, 650 a.a., Sigma-54 dependent sensory box protein from Pseudomonas putida KT2440

 Score =  199 bits (507), Expect = 2e-55
 Identities = 125/340 (36%), Positives = 186/340 (54%), Gaps = 19/340 (5%)

Query: 293 RTSTRGGARPMARRADAPAATGAARPEADDILPLLDKAVRVLNEGVSVLVNGETGSGKEV 352
           R++ R GA     R D       A  E      +L  A R      ++L+ GE+G+GKE+
Sbjct: 315 RSTRRPGAFTARYRLDQLNGNSKANRE------MLQLAKRFATSHSTILITGESGTGKEL 368

Query: 353 FSRRLHAASRRAAGPFVAVDCASLPETLIESELFGYDEGAFTGARRKGMAGRIREAHGGV 412
            ++ +H  S R  GPFVA++CA+ PE+L+ESELFGY+EGAF+G+R+ G  G    AH G 
Sbjct: 369 LAQGIHNESPRRQGPFVAINCAAFPESLLESELFGYEEGAFSGSRKGGKPGLFEAAHRGT 428

Query: 413 LFLDEIAEIPLALQTRLLRVLEERVVTPLGGGQGVAVDFDLVCATHGDLPALVKAGRFRA 472
           LFLDEI ++P++LQTRLLRVL+ER V  LG  + +A+D  ++ ATH DL + +  G FR 
Sbjct: 429 LFLDEIGDMPVSLQTRLLRVLQEREVLRLGSTEPIAIDVRIIAATHKDLRSAMDDGDFRT 488

Query: 473 DLMYRVAGFTVALPPLSRRADRHTLIAR----LFLESGGAAKHLRLESDALEALAAYRWP 528
           DL +R+    +   PL  R +   LI R      L  G       + +  L  L  Y WP
Sbjct: 489 DLYFRLNILRLQTTPLRERPEDIALICRGISQRLLVQGQPPGAADIPAALLPYLERYAWP 548

Query: 529 GNVRELRSTL-RAVVALAD------TGDSVTAAALPAHLLGTHAAPTTDAATEAALAPQA 581
           GNVREL + + RA+++  +        +   A  LP    G   +P    ++        
Sbjct: 549 GNVRELENVIERAMLSARELLEEHRVNEQYLARVLPELCEGPPPSPARKKSSGETDLHTI 608

Query: 582 GPLQAITRHAIDEALKACDHDVSKAARRLGVHRSTVYRHI 621
           G + A  RH + E L++C  ++ +AARRLG+ R+T++R +
Sbjct: 609 GKV-AQLRH-VKETLESCRGNLDEAARRLGISRTTLWRRL 646