Pairwise Alignments

Query, 728 a.a., Inner membrane protein YqiK from Variovorax sp. SCN45

Subject, 589 a.a., Inner membrane protein YqiK from Alteromonas macleodii MIT1002

 Score =  189 bits (479), Expect = 4e-52
 Identities = 121/468 (25%), Positives = 251/468 (53%), Gaps = 21/468 (4%)

Query: 5   IFAIVILAVVILGLFAMFAKFYRKIEQGHALIVNTLRAEPEVTFTGRMVYPIIHKAELMD 64
           I   +++ ++++GL  +FAK Y +  +  A +   L  E  +   G +V P++H+   ++
Sbjct: 15  IAGAIVVGLIVIGL--IFAKLYTRATKETAFVRTGLGGEKVIKDGGAIVLPVVHEIIPVN 72

Query: 65  ISVKTIEIDRSGNEGLICRDNIRADIKVKFFVRVNKTADDVLKVAQGIGCARASNHETLE 124
           ++   IE+++   + LI +D +R D+K  F++RV   A+ +   AQ +G  R +  E ++
Sbjct: 73  MNTLRIEVEKIQKDALITKDRMRVDVKADFYLRVAPNANGISMAAQTLG-TRTTRAEEVK 131

Query: 125 ELFSAKFSEALKTVGKSMEFVDLYQARDGFRDQIISQIGNDL--SGYVLEDAAIDFLEQT 182
           +L  +KF + L+ V   M   ++++ R  F  ++   + NDL  +G  LE  ++   +QT
Sbjct: 132 KLMESKFVDVLRAVAAEMSMTEMHEQRADFVQKVQQSVANDLEKNGLELESVSLTGFDQT 191

Query: 183 PLSELDSNNILDAQGIKKITELTAVEHVRTNELRRNEEMQIKKKNVETQEALLELERQQA 242
            L   + NN  DA+G  ++T++   +   TN++++   + I+++N+  ++  LE++R + 
Sbjct: 192 DLQFFNENNAFDAEGRARLTKIIEEKRKETNDIQQENRIFIEQRNLAAEKQSLEVKRDEE 251

Query: 243 DATARQQREIASVRAREEAETAKIQAEERTKSETARLVAEQSVSVQQENVQREKEVAENN 302
           +A   Q++ +A  R  ++AE AK Q E + + E    +A+   +++   +++ +E+    
Sbjct: 252 EARLAQEQILAFKRQEQKAEIAK-QREMKEREEREAEIAKNR-AIEAAEIEKSREIETQE 309

Query: 303 RKRAVAVEEEKVIRARDLEIVDREKEVTLQRIEKDKAVEVQKKAIADVIRERIVVERTVA 362
             +  A+E+ ++ + +++E+ ++ K++ +    ++++    K A A         E+   
Sbjct: 310 IAKRQALEQARIRQQQEVEVSEQIKQIAVATKSEEESAARAKAAEA---------EKAKV 360

Query: 363 EQEEAIKELRVVAEAERTKKSVVIMAEGQAEEKMVIDLKQAETQEKRARHKAAEELT--- 419
           E+ EA+   ++VAEAER K+  VI A  +AE + V    +A+ +++ A + AA  LT   
Sbjct: 361 EKVEAVTTAKMVAEAERKKQIEVIDARKEAEREAVGITVEAQAKKEAAENSAAAILTEAK 420

Query: 420 -LADAKLKIAERDAESKKREAEGVEAITAAPG-LAAAKVEIATAQAKL 465
             ADAK+  AE D +    EA+G +A+  A   L   ++E+  A A L
Sbjct: 421 AAADAKMLEAEADEKVLAVEAQGKQALYEAENTLKTEQIELQKALAML 468



 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 88/383 (22%), Positives = 167/383 (43%), Gaps = 44/383 (11%)

Query: 231 QEALLELERQQADATARQQREIASVRAREEAETAKIQAEERTKSETARLVAEQSVSVQQE 290
           ++AL+  +R + D  A     +A   A   +  A+      T++E  + + E        
Sbjct: 85  KDALITKDRMRVDVKADFYLRVAP-NANGISMAAQTLGTRTTRAEEVKKLMESKFVDVLR 143

Query: 291 NVQREKEVAENNRKRAVAVEEEKVIRARDLEIVDREKE---------VTLQ--------- 332
            V  E  + E + +RA  V++ +   A DLE    E E           LQ         
Sbjct: 144 AVAAEMSMTEMHEQRADFVQKVQQSVANDLEKNGLELESVSLTGFDQTDLQFFNENNAFD 203

Query: 333 ---RIEKDKAVEVQKKAIADVIRE-RIVVE-RTVAEQEEAIKELRVVAEAERTKKSVVIM 387
              R    K +E ++K   D+ +E RI +E R +A ++++++  R   EA   ++ ++  
Sbjct: 204 AEGRARLTKIIEEKRKETNDIQQENRIFIEQRNLAAEKQSLEVKRDEEEARLAQEQILAF 263

Query: 388 A--EGQAEEKMVIDLKQAETQEKR-ARHKAAEELTLADAK----LKIAERDA--ESKKRE 438
              E +AE     ++K+ E +E   A+++A E   +  ++     +IA+R A  +++ R+
Sbjct: 264 KRQEQKAEIAKQREMKEREEREAEIAKNRAIEAAEIEKSREIETQEIAKRQALEQARIRQ 323

Query: 439 AEGVEAITAAPGLAAAKVEIATAQAKLASFEAEASGKEKLGLADVHVRQADADAILKAGQ 498
            + VE       +A A      + A+  + EAE +  EK+         A+A+      +
Sbjct: 324 QQEVEVSEQIKQIAVATKSEEESAARAKAAEAEKAKVEKVEAVTTAKMVAEAER-----K 378

Query: 499 ADAQVIEARSQA--EAAGMRAKFEAEASGKEKLGLAEVNVRTADAEATLKSGQADAQVIE 556
              +VI+AR +A  EA G+  + +A+    E    A +    A A+A +   +AD +V+ 
Sbjct: 379 KQIEVIDARKEAEREAVGITVEAQAKKEAAENSAAAILTEAKAAADAKMLEAEADEKVL- 437

Query: 557 ARFGAEAKGLHEKFEAMKSMSPE 579
                EA+G    +EA  ++  E
Sbjct: 438 ---AVEAQGKQALYEAENTLKTE 457