Pairwise Alignments

Query, 774 a.a., ATPase, AAA family from Variovorax sp. SCN45

Subject, 799 a.a., ATP-dependent protease La (EC 3.4.21.53) Type I from Sphingobium sp. HT1-2

 Score = 50.8 bits (120), Expect = 3e-10
 Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 39/241 (16%)

Query: 479 KLAERKGLTPAQIRTAVRFAGLAKTDDASVEALIERQLRNADLALGTLDTGRGERRSVTT 538
           K+A+ K    A+ +       L      S EA + R     D+ LG L  G+  R     
Sbjct: 253 KIAKAKLSKEARAKATAELKKLKGMQPMSAEATVVRNY--LDVLLG-LPWGKKGRVKTDL 309

Query: 539 YDLDMLNVETRFEIPRIAQ------ALKARGHGT----LCFYGAPGTGKTALAEHIAKAL 588
                +  E  F + ++        A++AR +      LC  G PG GKT+L   IAKA 
Sbjct: 310 KKAQAILDEDHFALEKVKDRIIEYLAVQARTNKLKGPILCLVGPPGVGKTSLGRSIAKAT 369

Query: 589 GRPLL------VKQASDLMS---KYVGETEQNMAAMFREAENEKAVLLLDEADSFLQDRR 639
           GR  +      V+  +++      Y+G     + +  ++A     + LLDE D   QD R
Sbjct: 370 GREFVRQSLGGVRDEAEIRGHRRTYIGSLPGKVVSNLKKAGTMNPLFLLDEIDKLGQDFR 429

Query: 640 G--AQRTYEVTEVNEMLQGMERF--------NGVFVCTTN-------LLDRLDQAALRRF 682
           G  A    EV +  +  +  + +        + +FV T N       LLDR++   L  +
Sbjct: 430 GDPASALLEVLDPEQNSKFQDHYLEIDVDLSDVMFVTTANSLNLPQPLLDRMEIIRLEGY 489

Query: 683 T 683
           T
Sbjct: 490 T 490



 Score = 35.8 bits (81), Expect = 9e-06
 Identities = 59/273 (21%), Positives = 104/273 (38%), Gaps = 23/273 (8%)

Query: 278 AKSTLTPHDFSFVQEDAQMLVTLLRAAVARKEPGVNVLLYGPPGTGKTELAKVVAQAAGL 337
           A++ L    F+  +   +++  L   A   K  G  + L GPPG GKT L + +A+A G 
Sbjct: 312 AQAILDEDHFALEKVKDRIIEYLAVQARTNKLKGPILCLVGPPGVGKTSLGRSIAKATGR 371

Query: 338 ELFEVEYAD-RDGNSLSGRDR-----YRSLQIAQVFLKGSAQAALLFDEVEDVFPPISTE 391
           E         RD   + G  R          ++ +   G+     L DE++ +      +
Sbjct: 372 EFVRQSLGGVRDEAEIRGHRRTYIGSLPGKVVSNLKKAGTMNPLFLLDEIDKLGQDFRGD 431

Query: 392 AAQFMARAEQIPAPTSGSVSGKAWVNQILEANPVPTLWVTNRIEQIDPAFRRRFAYHLEL 451
            A  +    ++  P   S     ++   ++ + V  +   N +    P   R     LE 
Sbjct: 432 PASALL---EVLDPEQNSKFQDHYLEIDVDLSDVMFVTTANSLNLPQPLLDRMEIIRLEG 488

Query: 452 KSPPPG---AREQLVKKTLEGVVVSEAFTAKLAERKGLTPAQIRTAVRFAGLAKTDDASV 508
            +       A+  LV K +      +A   K  E + +T A +R  +R+     T +A V
Sbjct: 489 YTEDEKVEIAQRHLVPKQI------DAHGLKNGEFE-VTEAAVRDLIRY----YTREAGV 537

Query: 509 EALIERQLRNADLALGTLDTGRGERRSVTTYDL 541
             L     R A  AL  +  G  ++  +T  +L
Sbjct: 538 RTLEREVARLARKALRKILEGAFDKVEITPENL 570