Pairwise Alignments

Query, 288 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  149 bits (375), Expect = 1e-40
 Identities = 98/292 (33%), Positives = 154/292 (52%), Gaps = 12/292 (4%)

Query: 1   MRCVVAIAEAGSLTKAAERLGLAQPALTQTLNRLEQELGTRLFTRSRRGAALTDAGLAVI 60
           +R  +A+AE     +AA++LG++QP L+Q +  LEQELG RLF R+ R   L++AG   +
Sbjct: 6   LRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEAGRLFL 65

Query: 61  DDLRASLAYGDTAAERARAMGAGRAGRLTIGFVTHAVY-EVLPNALRRLRAGHPQLEVVL 119
           ++ R  LA  + AA+ AR    G  G + IGF + A +   +P A+   R   P + + L
Sbjct: 66  EEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPAVHLNL 125

Query: 120 REMSNAEQVAALEGGRIDIALLHPPVTVTARVHELRLGEEPLIAALPAAWPLHE--DGCV 177
           +EMS+ +    +    I++ L+  P+ +   +    L  EPL+A + A+ PL E  +  V
Sbjct: 126 KEMSSRDVAEGVFDESIEVGLMR-PMPLPEGLVATELFREPLVAVINASHPLAEGTEQGV 184

Query: 178 SLADVARHGLVWFPEQQIPALRAQLLGALRRAGHETRVVQDANRTLTVLACVAAGLGWSL 237
            +A +A    V+FP      L AQLL   R AG      Q+A   +T++  V+AGLG S+
Sbjct: 185 YMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGLGVSV 244

Query: 238 LPRSVRALQHEGVRYAEVRDGAGLPAFELSALWLA---RSRPTFADTFAAML 286
           LP S + ++ EGV Y  + D        ++A+WL    R     A  FA +L
Sbjct: 245 LPASFQRMRIEGVVYRTLLDEEA-----MTAVWLVQRERGHSVMAKAFAELL 291