Pairwise Alignments

Query, 591 a.a., ATP-dependent DNA helicase RecQ from Variovorax sp. SCN45

Subject, 611 a.a., ATP-dependent DNA helicase from Escherichia coli BL21

 Score =  490 bits (1262), Expect = e-143
 Identities = 267/591 (45%), Positives = 376/591 (63%), Gaps = 27/591 (4%)

Query: 1   VVGGGDALVLMPTGGGKSLCYQIPAIARQRAGHGVAIVVSPLIALMHDQVGALHEAGVSA 60
           V+ G D LV+MPTGGGKSLCYQIPA+      +G+ +VVSPLI+LM DQV  L   GV+A
Sbjct: 39  VLSGRDCLVVMPTGGGKSLCYQIPALLL----NGLTVVVSPLISLMKDQVDQLQANGVAA 94

Query: 61  AFLNSTLDWEETQDVERRMLRGEITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEA 120
           A LNST   E+  +V      G+I LLY APER+    FL  L          L A+DEA
Sbjct: 95  ACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNP----VLLAVDEA 150

Query: 121 HCVSQWGHDFRPEYRALTVLHERYAGVPRIALTATADDLTRADIVERLQLEEARQFVSSF 180
           HC+SQWGHDFRPEY AL  L +R+  +P +ALTATADD TR DIV  L L +    +SSF
Sbjct: 151 HCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSF 210

Query: 181 DRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVTLRDAGINALPYH 240
           DRPNIRY ++EK     QL+R+++ E  G +G++YC SR +VED A  L+  GI+A  YH
Sbjct: 211 DRPNIRYMLMEKFKPLDQLMRYVQ-EQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYH 269

Query: 241 AGLDAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQETGRA 300
           AGL+  +R   Q++F R++  ++VAT+AFGMGI+KP+VRFV H D+P+NIE YYQETGRA
Sbjct: 270 AGLENNIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRA 329

Query: 301 GRDGGPADAWMAYGLQDVVNQRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLL 360
           GRDG PA+A + Y   D+   RR ++E P G + + + R KL+A+ + AEA  CRR+ LL
Sbjct: 330 GRDGLPAEAMLFYDPADMAWLRRCLEEKPQG-QLQDIERHKLNAMGAFAEAQTCRRLVLL 388

Query: 361 GYFGE-KSTPCGNCDNCLNPPQVWDGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGK 419
            YFGE +  PCGNCD CL+PP+ +DG+  A+  LSTI RV Q     FG G++++++RG 
Sbjct: 389 NYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQ----RFGMGYVVEVIRGA 444

Query: 420 ATEKVKQFGHERVSTFGIGAEFSEVALRGVLRQLIATGALAVDAEAFNTLKLTEGSRAVL 479
             ++++ +GH+++  +G+G + S      V+RQLI  G +  +    + L+LTE +R VL
Sbjct: 445 NNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVL 504

Query: 480 RGEAQVTLRESVSSPAERSKSRREKTVKGAPSPAAAKLDDTGKKRFEALKAWRAEVAKEH 539
           RGE+ + L  +V           +K+  G          +  +K F  L+  R  +A E 
Sbjct: 505 RGESSLQL--AVPRIVALKPKAMQKSFGG----------NYDRKLFAKLRKLRKSIADES 552

Query: 540 NLPAYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGSEVLRVCEA 590
           N+P YV+F+DATL  +AE+ P T  ++  ++G+G +KLE +G   + +  A
Sbjct: 553 NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRA 603