Pairwise Alignments

Query, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  149 bits (376), Expect = 4e-41
 Identities = 74/214 (34%), Positives = 131/214 (61%), Gaps = 1/214 (0%)

Query: 4   DFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAI 63
           D++   Q  P+L R AL T+ +T    A+  VLGL + IGR +  R WI       +  I
Sbjct: 5   DWNYAIQLLPELFRAALNTIGVTLLGFAIAIVLGLFLAIGRRSA-RIWISWPIGGVIEFI 63

Query: 64  RGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAA 123
           R TPLL+Q++ L++ LP++G+ L A   GVLG+G++   Y++E+ R  + ++ +GQ  A 
Sbjct: 64  RSTPLLIQVYFLYYVLPNYGVSLTAMQVGVLGIGLHYACYLAEVYRSGLDAVPRGQWEAV 123

Query: 124 QSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVS 183
            +L M+P +A R I+LPQA+  ++PP+GN  +A++K++ ++S +T+ ++M + + I S +
Sbjct: 124 TALNMSPSLAYRNIILPQALRPILPPVGNYLVAMLKDTPVLSAITVVEIMQQAKNIGSET 183

Query: 184 YRSLEVYLAIAVVYFVLTGTMTLILRHFEQKLRQ 217
           +R LE    + V +  L+  +  ++R  E +L Q
Sbjct: 184 FRYLEPITMVGVFFLALSIVLAYLVRRVEARLEQ 217