Pairwise Alignments

Query, 145 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 146 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  101 bits (252), Expect = 4e-27
 Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 7   RVVYISLYEGIAIVAASAGLALMTDAGLGHSGVLAVAASVIAVLWNLAFNALFERWESRQ 66
           R+V+   YE  A++  +  L+ +    L  +G LAV  SVIA+LWN+ +N L +RW   +
Sbjct: 13  RLVHAVGYEVFAVLLCAPLLSWIMGKSLATAGTLAVTLSVIAMLWNMVYNVLVDRWVQTE 72

Query: 67  AVRGRSVRRRIAHAIGFEGGLIAFLVPMFAWGLGVSLWQALVMDLGLVVFFLVYTFVFNW 126
            +  ++   R  H +GFE GL+ + +P+ AW L +SL QA +++LG  V  L YT V+NW
Sbjct: 73  RINWKA-STRFVHGLGFEAGLVVWCLPVAAWMLEISLLQAFMVELGFFVIILPYTVVYNW 131

Query: 127 AFDR 130
           AFD+
Sbjct: 132 AFDK 135



 Score = 39.3 bits (90), Expect = 3e-08
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 67  AVRGRSVRRRIAHAIGFEGGLIAFLVPMFAWGLGVSLWQALVMDLGLVVFFLVYTFVFNW 126
           A++  S   R+ HA+G+E   +    P+ +W +G SL  A  + + L V  +++  V+N 
Sbjct: 4   AMKNVSFTERLVHAVGYEVFAVLLCAPLLSWIMGKSLATAGTLAVTLSVIAMLWNMVYNV 63

Query: 127 AFDR 130
             DR
Sbjct: 64  LVDR 67