Pairwise Alignments

Query, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 17/343 (4%)

Query: 14  VTLATAL-VPAHAQGVIKIGEINSYK-AQPAFLEPYKKGMELAVDEINAKGGINGKKIEL 71
           + +ATAL V ++ Q  +KIG       A  AF E Y KG + A D+INA GG+NG+KI L
Sbjct: 13  LAVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKIVL 72

Query: 72  ISRDDNANPGDAVRVAEELISREKIDVLAGAFLSNTGLALADFAKQKKFFYLAAEP-LTD 130
           +  DD   P  AV VA  L+ ++K+  + G F S+  +  ++   +     +A  P  T+
Sbjct: 73  VKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAG--VIAITPGSTN 130

Query: 131 KIVWSNGNKYTYRLRPSTYMQVAMLVPEAAK-LKKKRWAVVYPNYEYGQSSVATFKTLLK 189
             V   G    +R+      Q  +        LK K+ AV++    YGQ      K  L+
Sbjct: 131 PQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKAQLE 190

Query: 190 AAQPDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNVLFGADLSKFVREGNTRGLFKD 249
             +  V+ V  +    G+ D  +VV  +     D ++      +    VR+   +GL KD
Sbjct: 191 --KRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGL-KD 247

Query: 250 REVVSVLTGEPEYLDPLKDEAPNGWIVTG-YPWYGVK---TPEHKAFLDAYQAKFKDYPR 305
              V  ++ +    D L   A     V G Y  +G      P+ KA ++ ++ K    P 
Sbjct: 248 ---VKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFR-KAGTEPE 303

Query: 306 LGSVVGYSAIHSIVAGIQKAGGTDTEKLVAAFKGLQVDTPFGK 348
             ++  Y+++ ++ A    A     E      K   V T  G+
Sbjct: 304 GYTLYAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGE 346