Pairwise Alignments

Query, 1130 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 1248 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  208 bits (529), Expect = 2e-57
 Identities = 146/435 (33%), Positives = 230/435 (52%), Gaps = 25/435 (5%)

Query: 648  EIEAHRRTDAALQTAKEAAEAANQAKTRYVAGMTHELRTPLNSILGYSQILLKGDAVTPP 707
            ++   R T  A   AK+AAE A + K+ ++A M+HE+RTP+N+I+G + + LK D     
Sbjct: 695  DVTQARATAEAQARAKDAAEDAARTKSDFLANMSHEIRTPMNAIIGMAHLALKTDLDPRQ 754

Query: 708  REAVQTIHRSGEHMLGLIDGLLDLARIEAGRLQLEPAPLALPAFLDQLVHMVRPQAENKG 767
            ++ V+ I +SG+H+LG+I+ +LD ++IEAG+L++E   + L   L+ + +++  +A  KG
Sbjct: 755  KDYVRKIQQSGQHLLGIINDILDFSKIEAGKLEVEATEIHLDKVLENVGNLISEKATAKG 814

Query: 768  LAFVYTHAGRLPPWVHADAKWLRQILINLLTNAVRFTDSGTVTLHVDARRE-----VLRF 822
            L  ++     +P  +  DA  L Q+LIN   NAV+FT++G + + V    +     +LRF
Sbjct: 815  LELLFDVGAGVPLDLMGDALRLGQVLINYANNAVKFTEAGEIVVAVRLMEDLGPDVMLRF 874

Query: 823  DVVDTGIGVAPQDHQRIFLPFERGAAGRRRGEPGTGLGLTITGLLTSLMGGELKLASTSS 882
            +V DTGIG+  +   R+F  F +      R   GTGLGL I+  L  LMGG + + S   
Sbjct: 875  EVRDTGIGLTDEQKARLFQSFSQADTSTTRKFGGTGLGLAISKKLAELMGGSVGVDSVPG 934

Query: 883  QGSTFSVRVYLREVADPGPQARAGAPRQPV--SGYLGARRTLLVVDDQPVQRQMLAGMLA 940
            QGSTF     L +          G PR P+     L  RR +LVVDD    R +L  ML+
Sbjct: 935  QGSTFWFTARLGK----------GKPRAPLIPEAELQGRR-MLVVDDNENARAVLVDMLS 983

Query: 941  PLGFEVREAASGTECLDSLRE---ELP-SAILLDLTMDDMDGWQTATSVRASGFGDIP-I 995
             + FEV    SG + LD++R+   +LP   + LD  M DMDG + A  + +      P +
Sbjct: 984  AMSFEVDAVDSGAKALDAIRDAVLDLPYDVVFLDWQMPDMDGLEVAEQIHSIRLPFPPHL 1043

Query: 996  IIVSANMFENQAERLRAAGCQAFVGKPVIESELIATLERHLGLEWL--SPGDTPPRGDDE 1053
            I+V+A   E   +  +AA     + KPV  + L  ++ R    +       D    G  +
Sbjct: 1044 IMVTAYGREEIIKGAQAADIGEVLIKPVSPAALFDSIMRVFASDQRRDEAEDVSEGGSVD 1103

Query: 1054 AAPLRPRRLELSEDD 1068
             A LR  ++ L ED+
Sbjct: 1104 HAALRGLKVLLVEDN 1118



 Score = 60.1 bits (144), Expect = 1e-12
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 922  LLVVDDQPVQRQMLAGMLAPLGFEVREAASGTECLDSLREELPSAILLDLTMDDMDGWQT 981
            +L+V+D  + +++   +L   G EV  A +G   ++  R  +   IL+D+ M  MDG   
Sbjct: 1112 VLLVEDNDLNQEVAGEILRDAGIEVEIADNGLIAVEKARAGVYDLILMDMQMPVMDGVTA 1171

Query: 982  ATSVRASGFGDIPIIIVSANMFENQAERLRAAGCQAFVGKPVIESELIATLERHLGLEWL 1041
               +R  G  D+PII ++AN  +   ++   AG    + KP+    + +T+ R    E  
Sbjct: 1172 TREIRRLGHVDLPIIAMTANAMQADRDKCLEAGMNDHIAKPIDPDTMFSTISRWCAAE-- 1229

Query: 1042 SPGDTPPR 1049
                 PPR
Sbjct: 1230 -----PPR 1232