Pairwise Alignments

Query, 623 a.a., T6SS component TssF (ImpG/VasA) from Variovorax sp. SCN45

Subject, 588 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  253 bits (646), Expect = 2e-71
 Identities = 189/631 (29%), Positives = 302/631 (47%), Gaps = 57/631 (9%)

Query: 5   LLDYYNRELTYMHELGAEFAQRYPKIAGRLGMRGIEVSDPYVERLLEGFSFLTARIQLKM 64
           L D ++ EL Y+HELG +FA+  P++A  LG  G   SDP VERL+E F+FLTA+++LK+
Sbjct: 3   LKDRFSEELRYLHELGNDFAKDNPQLARLLGKAG---SDPDVERLMEAFAFLTAKLRLKL 59

Query: 65  DAEFPRFSQRLLEVVYPNFLAPLPAMAVVQIDGNLNEGSLKAGYELPRHTILRGRMIKGE 124
           + + P  +  +L++++PN+L PLP+  +++   +  + SL     +P+   L  + +  +
Sbjct: 60  EDDLPELTHPMLQILWPNYLRPLPSATIIRF--SPRKQSLSQSQHIPKGARLFSKPV--D 115

Query: 125 QTACEFRTGHAVTLWPVRIADAGIGPVPAEIAHAMPAVARQAKSALTIRIEAVGGARFSE 184
              CEFRT   V+L P  I+             A+ A      S + I ++ +     + 
Sbjct: 116 AVPCEFRTCTGVSLHPFEIS-------------AVSATQTLDSSVVRIGLQTLVERPLNT 162

Query: 185 MPIERLEFFLSGAELHALRVLELVAHHA--VGTVCRSGPGGNARIVPLGDDAIRHEGFSP 242
           +   RL+F LSG    AL +   ++ +   V  +       N  +  L  ++I   GFSP
Sbjct: 163 LGCARLDFHLSGDNRTALTLYLWISQYLKHVSVIM------NGEVRRLPANSIGFPGFSP 216

Query: 243 DQALLPYDARSFQGYRLLHEYFAFPDRYLFFSVNKLRAAAQAMSGSTMEIVILLDRADAD 302
           ++ALLPY    F GYR+L EYF FP R+ FFS+  L     A +   + I     R   D
Sbjct: 217 EEALLPYPQNVFDGYRILQEYFVFPKRFHFFSITGLEKLWPAQACPQVGIEFHFTRQLPD 276

Query: 303 LERLVDAKHFSLFCTPIINLVPRRSDRIPVGPGQHEHHAVIDRTRPRDFEIFTVE----- 357
             R V  + FSLFCTP +NL    ++ I +     +            +EIF+V+     
Sbjct: 277 TLR-VGTEDFSLFCTPAVNLFKHSAEPIDLASEAAQVELKPRSEAQSAYEIFSVDEVIST 335

Query: 358 RVTGHMANGSEEREFRPFLGSFAAD----DGDFGAYFSLRREPRLVSDRARAQGTRTSYT 413
           R T   + G   R FRPF  SFA +     G    Y+  + E  L  D            
Sbjct: 336 RTTTDGSTGEHLRTFRPF-ESFAHEIEHVQGRTALYYRCQLEASLRGD------------ 382

Query: 414 GSEVYVSLVDQHDAPFPHSLRHITLDALCTNRDLPLLLPTGLESDFTLRVSAPVRSIRIL 473
           G    ++ V      +   L   ++D  CTNRDLPL L    + +    V+ P+ +   +
Sbjct: 383 GVTHRIAFVRADANSYIGELETASIDLTCTNRDLPLALGVD-DINVLTEVTPPLATYTNI 441

Query: 474 RGPSRPYPALAEGALTWRLISHLGLNYLSLTDVDAAQGAAALREMLDLYGNLADPSVRRQ 533
             P+RPY  + +G L W LIS++ LNYLSL  V+  +      +   L+      +  ++
Sbjct: 442 CAPTRPYRPVLDGQLQWALISNMSLNYLSLLSVEPLKAVIRTYDFAALHDIQQARTTGKR 501

Query: 534 IQGVRSMALAPVFRRLPEPGPIVFGRGVEIALKIDEVAF-SGASPYLFGAVLEQFFSRHV 592
           + G+R +   P+   L +  PI   RG+   LK+D+ AF      YLFG VL  FF+ + 
Sbjct: 502 LDGIRELHTQPM-DWLIKGQPI---RGLHTQLKLDQAAFLCEGDLYLFGCVLAHFFALYA 557

Query: 593 SLNAFTEFALSSLQRGEIARWTPRVGRRPAV 623
           S+N+F +  + +    E   W  + G++P +
Sbjct: 558 SINSFHQLEVINTTNNEHYTWPIQTGKQPLI 588