Pairwise Alignments

Query, 623 a.a., T6SS component TssF (ImpG/VasA) from Variovorax sp. SCN45

Subject, 606 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  350 bits (899), Expect = e-101
 Identities = 220/630 (34%), Positives = 337/630 (53%), Gaps = 39/630 (6%)

Query: 5   LLDYYNRELTYMHELGAEFAQRYPKIAGRLGMRGIEVSDPYVERLLEGFSFLTARIQLKM 64
           LL YY +EL+++  LG EFA +YPKIA RL + G    DP+ ERL+E FSFL+AR+  K+
Sbjct: 5   LLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKL 64

Query: 65  DAEFPRFSQRLLEVVYPNFLAPLPAMAVVQIDGNLNEGSLKAGYELPRHTILRGRMIKGE 124
           D EFP   +  LEV+YP++L P P+M++V++    +E   +A Y + RHT +    ++G 
Sbjct: 65  DDEFPEIVESFLEVLYPHYLRPTPSMSIVELSLGRHEKVTEA-YRVARHTEMHANPVEG- 122

Query: 125 QTACEFRTGHAVTLWPVRIADAGIGPV--PAEIAHAMPAVARQAKSALTIRIEAVGGARF 182
              C+FRT + V LWP+ +  A    +   A   H+   VAR     L IR+ A G A F
Sbjct: 123 -VVCKFRTCYPVELWPIAVQQASFTEMERSAFNGHSADLVAR-----LRIRLAATGDALF 176

Query: 183 SEMPIERLEFFLSGAELHALRVLELVAHHAVGTVCRSGPGGNARIVPLGDDAIRHEGFSP 242
            +M + RL FFL G     L++ EL+ ++           G +R V L  DA++  G++ 
Sbjct: 177 GQMDMNRLRFFLDGEATLMLQLYELLFNNLAKATLSFDDQGRSREVALPADALKTVGYAR 236

Query: 243 DQALLPYDARSFQGYRLLHEYFAFPDRYLFFSVNKLRAAAQAMSGSTMEIVILLDRAD-- 300
           D+ L+ Y  RSF GYRLLHEYF FPD+++FF ++      Q  +   +E+       D  
Sbjct: 237 DEGLVDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILQGKAIEQVEVNFYFSDYDLS 296

Query: 301 ---ADLERLVDAKHFSLFCTPIINLVPRRSDRIPVGPGQHEHHAVIDRTRPRDFEIFTVE 357
              A L + +   +F L CTPIINL  ++++ I +   QHE+    D       E+ +++
Sbjct: 297 ERLARLTQNIGRNNFKLNCTPIINLFRQQAEPIKLTHTQHEYQVTPDTRLHNAAEVVSID 356

Query: 358 RVTGHMANGSEER--EFRPFLGSFAADDGDFGAYFSLRREPRLVSDRARAQGTRTSYTGS 415
           RV      G  ++    +PF       D     + + RR           QG  T+ +  
Sbjct: 357 RVRRVRKLGGIDQVATCQPFFEPRGEQDPHSSFWVARRRN----------QGDATAMS-- 404

Query: 416 EVYVSLVDQHDAPFPHSLRHITLDALCTNRDLPLLLPTGLE-SDFTLRVSAPVRSIRILR 474
              + +VD+       S   +++   C+NRD+PL+LP G E  DFT+  ++ ++ IR LR
Sbjct: 405 ---IRVVDRDLELIDASSDTLSIGLTCSNRDVPLMLPFGGERGDFTIPANSVIKDIRCLR 461

Query: 475 GPSRPYPALAEGALTWRLISHLGLNYLSLTDVDAAQGAAALREMLDLYGNLADPSVRRQI 534
            P+          L WRLI+HL LN+LSL     +QG   L E+L LY      ++R+QI
Sbjct: 462 KPTATVRVPLGKGLIWRLIAHLSLNHLSL----VSQGREVLLELLSLYNYRNVSAIRKQI 517

Query: 535 QGVRSMALAPVFRRLPEPGPIVFGRGVEIALKIDEVAFSGASPYLFGAVLEQFFSRHVSL 594
            G+++++  PV  R+  P P  F RGV I L +DE  F G+  +LFG VL+ FF ++ S+
Sbjct: 518 NGIKAISSEPVVARIGHPRP-NFVRGVGITLTLDESQFIGSGVFLFGRVLDHFFGQYCSM 576

Query: 595 NAFTEFALSSLQRGE-IARWTPRVGRRPAV 623
           N+FT+  L + QR + + +W  R G +P V
Sbjct: 577 NSFTQLTLRTQQREKRVVQWPARTGDQPLV 606