Pairwise Alignments

Query, 628 a.a., T6SS forkhead associated domain protein ImpI/VasC from Variovorax sp. SCN45

Subject, 390 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 12/190 (6%)

Query: 405 VAPAVVATSPSPSPSPATSTTDSSSEALFKAFLEGAGVP----EIAGQQPLDIEAMQRLG 460
           V P   A     +P        ++S+A +  F +  G+P    +  G++ L I    ++ 
Sbjct: 169 VVPTWAAPDRQVNPPEPVIAAPAASQAFWPQFAQALGLPLDTLDTPGREALAI----KVA 224

Query: 461 RIMRAFTDGTIELLSSRAMLKREVRAEITMIVDEENNPFKILPNGRAVLMQMFGARMPGF 520
            ++R   +G  + L +R  L  E+   +   V    NP K+  + +A +  + G    G 
Sbjct: 225 GLLRHAIEGLQQSLRTRDELNSEINVALVSPVLNIRNPLKVCADSQAAMASLLGTGESGE 284

Query: 521 LPPEAAVHDALGDLQSHQLGMVAGMRAALLTLLQRFDPAALSSNTPHDGGIGEKLLPGGR 580
           L  E AV +A  DLQ HQL MV   RAA+   L  F P  L      +G    K      
Sbjct: 285 LAAEQAVAEACRDLQVHQLAMVVACRAAVRGALAAFAPGQLLPCFEREG----KRPRFFT 340

Query: 581 EARLWRELQQ 590
           EA  WR  Q+
Sbjct: 341 EAAHWRSYQR 350



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 45/192 (23%), Positives = 66/192 (34%), Gaps = 21/192 (10%)

Query: 25  GGTIGRSPDNHLVLPDEQRQISRLQATVRFDEDGAAVLRNMSAVLPISVNGRTLVHEQEA 84
           GG IGR      ++PD  R IS   A V + E    +    S  + +S +   L   Q  
Sbjct: 25  GGVIGRGVGCDWIIPDAHRLISSHHALVSYREGHYFLTDISSNGITVSGSMERLDKGQAR 84

Query: 85  RVADGDRVEIGSYVLEAASALRAAPAVVVAPPPPQAPPLQAPSMPAPQPFTQAPVSSAPI 144
            + +G+  ++G   + A                P    L    + A         SSA +
Sbjct: 85  LITEGEVYQLGQLEIRARLVANERRPFARNDLIPDDAFLGLDPLHALDREQLCVDSSAEL 144

Query: 145 DALLPASSGADVFSDLFGEGTLPIGDTQPTVAMPPPVPRAPVQSPPPAVPPVQVHVPAPP 204
           DAL  ++                     P   M  PV R  +  P  A P  QV+   PP
Sbjct: 145 DALDAST------------------QVSPQSHMQGPVDRDHLVVPTWAAPDRQVN---PP 183

Query: 205 PPPMPAQAPPKA 216
            P + A A  +A
Sbjct: 184 EPVIAAPAASQA 195