Pairwise Alignments

Query, 456 a.a., T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain from Variovorax sp. SCN45

Subject, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 7e-33
 Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)

Query: 65  NPLVAAANPLLDLIPQIRATGHHPAPAQLREHLVDEVRRFETRAQQAGIAPEVIIGARYC 124
           N ++ AA PL  L+ ++R     P    + + +  ++       +Q G  P  ++   Y 
Sbjct: 69  NLMLDAAAPLFGLVMRLRTLDELPNIKDVHQQVRIQIDSIREEIRQHGYEPAQLLAYSYG 128

Query: 125 LCTAVDEAAALTPWG-GSIWSSQSLLVMFHNETWGGEKFFQLLSRLVQNPQQHLHLIELI 183
           LC  +DEA    PWG  S WS + LL +FH+ETWGGEK F +++RL+Q P+++  ++E +
Sbjct: 129 LCLYIDEAVMERPWGKSSCWSHEPLLSIFHDETWGGEKIFTVITRLMQEPKRYQDVLEFM 188

Query: 184 YFCLALGFEGRFRVIDNGRSQLETLKQRLLQIIRQTRGEIAVPL-SPHWQDASAPVRRTR 242
           YF L LG +G++ +   G   L  L  +L  IIR+ RG     +  P+   A    R +R
Sbjct: 189 YFALCLGLKGKYALAPKGEETLNALIHQLHGIIRELRGPTPEEVCDPYTNVAPRNFRMSR 248

Query: 243 NWLPVWAVGAVAAVLLLVAFALLTFNLAGTSDGAFAAVNAV 283
            W P W+   ++A+ + VA+ + ++ L   +     ++N +
Sbjct: 249 IW-PWWSPLVISAIAMAVAYGIYSYRLHLITTEVLESLNGI 288