Pairwise Alignments

Query, 304 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  111 bits (277), Expect = 2e-29
 Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 11/285 (3%)

Query: 17  GLSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAARVTESLAPEFMPYYFP 76
           G+ L ++  ++ +GL +IFG + V+N AHGEF+ +G Y+ YL       LA +F  + + 
Sbjct: 11  GILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYL-------LAAKFGLHPYA 63

Query: 77  IAIALAFVFAFIVGWIVEWALIRHLYKRPLDT-LLATWGVSLGLQQIFRTFIGPKEVSPT 135
            A+ +  +  F +G  V+  LI+ L        + AT G+S  L  +     G    S  
Sbjct: 64  AAVPIV-ILLFAIGAAVQRFLIQPLLGAEEHIQIFATVGLSTALVNLALLVFGADLYS-- 120

Query: 136 LPEWLMGSWTPHEGLDIPINGLFVLVLTALVTGGVLVALHKSRWGLRVRATVANRTMANA 195
           +P           G  +    L + V    +  G+ + +  +  G  +RAT  NRT A  
Sbjct: 121 IPPSAAQGTVMVGGFSLVKGQLVMFVCALALVAGLHLFMQSTALGRAIRATAQNRTAALL 180

Query: 196 TGIDTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDAFLVVTFGGAASLFGT 255
            G+   +   + F IG    G+A A    +    PT G+ +++ AF+VV  GG  S++G 
Sbjct: 181 MGVKVDQIYVIAFGIGAACVGLASALVMPLYPVTPTIGTYFVLTAFVVVVLGGMRSMYGA 240

Query: 256 VVSAFGIAQTQSVSEFFMTGSMAKVLTLSLIVFILMLRPQGLFAV 300
              A  I    S+S +++   + +V+  ++ + IL+ +P GLF +
Sbjct: 241 FFGAMIIGLVDSLSGYYIAPDLKEVVYFAIFLAILIFKPTGLFGL 285