Pairwise Alignments

Query, 304 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  112 bits (281), Expect = 8e-30
 Identities = 88/301 (29%), Positives = 140/301 (46%), Gaps = 15/301 (4%)

Query: 6   MMNIGLMQGFAGLSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAARVTES 65
           M  I L Q   GL+L +V  L+ +G  +++G +G+IN AHGE   I AY     A ++ +
Sbjct: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAY----LAAISLA 56

Query: 66  LAPEFMPYYFPIAIALAFVFAFIVGWIVEWALIRHLYK-----RPLDTLLATWGVSLGLQ 120
           L   F    FP+ I    +F  +V  +  W + R  YK       L  L++  G+SL LQ
Sbjct: 57  LLAYFGIESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQ 116

Query: 121 QIFRTFIGPKEVSPTLPEWLMGSWTPHEG---LDIPINGLFVLVLTALVTGGVLVALHKS 177
              +   G K+    +P  L G+W    G   + +    +F+LV        +   +  +
Sbjct: 117 NYAQIAQGAKQQG--IPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYT 174

Query: 178 RWGLRVRATVANRTMANATGIDTRKTDRLTFAIGCGIAGVAGAAFT-TIGSTGPTSGSLY 236
           + G   RAT  +R MA+  GI+T +     F IG  +A +AG   T   G+    +G + 
Sbjct: 175 KLGRMCRATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFII 234

Query: 237 IVDAFLVVTFGGAASLFGTVVSAFGIAQTQSVSEFFMTGSMAKVLTLSLIVFILMLRPQG 296
            + AF     GG  SL G ++    +  ++S+    +      V + SL+V IL+ RPQG
Sbjct: 235 GIKAFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQG 294

Query: 297 L 297
           L
Sbjct: 295 L 295