Pairwise Alignments

Query, 304 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 1e-33
 Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 14/295 (4%)

Query: 6   MMNIGLMQGFAGLSLFAVLLLMGLGLAIIFGQMGVINMAHGEFMTIGAYSIYLAARVTES 65
           M+++ L Q   GL L  +  L+ +GL IIFG +  +N AHG F  +GAY  Y A  VT +
Sbjct: 1   MLDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGN 60

Query: 66  LAPEFMPYYFPIAIALAFVFAFIVGWIVEWALIRHLYKRPLD-TLLATWGVSLGLQQIFR 124
                    F +A+ +A +    + W VE  LI+ +Y  P    +L T G++L +Q+   
Sbjct: 61  ---------FWLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASV 111

Query: 125 TFIGPKEVSPTLPEWLMGSWTPHEGLDIPINGLFVLVLTALVTGGVLVALHKSRWGLRVR 184
              GP   +  +P  L G     + +  P   LF++   AL+  G+ + L ++R+G  VR
Sbjct: 112 LIWGPVGKNIAVPPELRGVLILGDFI-YPYYRLFLIGFAALIGIGLWLLLERTRFGALVR 170

Query: 185 ATVANRTMANATGIDTRKTDRLTFAIGCGIAGVAGAAFTTIGSTGPTSGSLYIVDAFLVV 244
           A   +    +  G +  +   LTFA+G G+AGVAG  F  +    P  G   +  AF+VV
Sbjct: 171 AGSESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVV 230

Query: 245 TFGGAASLFGTVVSAFGIAQTQS-VSEFFMTGSMAKVLTLSLIVFILMLRPQGLF 298
             GG  S  G +V    +   QS ++  +  G  A ++    +  ++++RP GLF
Sbjct: 231 VIGGMGSFGGALVGGLLVGVVQSMMTSLWPQG--ASLMIYGAMAAVILVRPYGLF 283