Pairwise Alignments

Query, 396 a.a., Urea ABC transporter, permease protein UrtC from Variovorax sp. SCN45

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  121 bits (303), Expect = 3e-32
 Identities = 108/361 (29%), Positives = 160/361 (44%), Gaps = 47/361 (13%)

Query: 15  SLLLLVLLLAVVLPLSLDIFRLNLVGKYLTYAFVAVGLVMVWGYGGVLSLGQGVFFGIGG 74
           +LL LV+   V LPL L      L  + L +A  A+   ++ GY G+LS GQG+FFG+G 
Sbjct: 16  ALLSLVVASLVALPLLLP--SATLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGA 73

Query: 75  YAMAMFLKLEASDPVTTKIQSTPGIPDFMDWNQITELPALWLPFKSLPLSLALVVLAPMA 134
           Y  A+ +                     + W     L             L   V     
Sbjct: 74  YGAALLMI-------------------HLQWGMFAAL-------------LGAAVFGAF- 100

Query: 135 LAWLVSFAMFKRRVGGVYFAIITQAVALICTVLIIGQQGYTGGVNGMTDL---KTLLGWD 191
           LA LV     +R   G+YF ++T A + +   L     G+TGG NG+ D+      +   
Sbjct: 101 LALLVGALAIRRT--GIYFVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGH 158

Query: 192 TRTDGAKYVLYYVCVGLLVLSILLCRW-IQTSKLGTLLLAMRDKEDRVRFSGYDVSNFKV 250
              D A    +YV V +L L I      +  S  G+ LLA+R+ E R    GYD  +FK+
Sbjct: 159 VLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKI 218

Query: 251 FIFCLAAGLSGIGGAMFALQVGFMSPSFVGIVPSIEMVIFCAVGGRMSLVGAVYGALLVN 310
            +F L+  ++GI GA++A+ + F   S + ++ S  ++I   VGG  SL G++ GA  + 
Sbjct: 219 LVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIV 278

Query: 311 AGKTLFSESFPDLWLFLMAGLFIGVTMAFPMGLAGVWEEKIRPWWKSRRQALREAAVKPP 370
               + SE +P  WL L+  + I V +    GL G   E        R  A R A  KP 
Sbjct: 279 LLGDVLSELWP-RWLMLLGVILILVVVFMRGGLWGGLTE-----LGKRLLATRNADDKPQ 332

Query: 371 A 371
           A
Sbjct: 333 A 333