Pairwise Alignments

Query, 264 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Variovorax sp. SCN45

Subject, 241 a.a., sugar ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  284 bits (726), Expect = 1e-81
 Identities = 142/247 (57%), Positives = 187/247 (75%), Gaps = 9/247 (3%)

Query: 18  LVARGLKKSYGSRTVVKDVSLDVQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAGDITID 77
           L A+ L K+Y SR VV+DVSL +  G++VGLLGPNGAGKTT FYMIVGLV+AD G + ID
Sbjct: 4   LKAQHLAKAYKSRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQADQGRVLID 63

Query: 78  GEPIAHMPIHRRARMGLSYLPQEASIFRKLTVEENVRAVLELQQEPDASGKLMPLSKQHM 137
              ++H P+H RAR G+ YLPQEASIFRKL+V +N+ A+LE ++E D  G+         
Sbjct: 64  DLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKELDRDGR--------- 114

Query: 138 EERLSELLADLRVDHLRDSPALALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVI 197
            + L  LL +  ++H+RD+  ++LSGGERRRVEIARALAT P+FILLDEPFAG+DPI+V 
Sbjct: 115 RKELESLLQEFHINHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVG 174

Query: 198 EIQRIISFLKERGIGVLITDHNVRETLGICDHAFIISDGHVLAQGTPSEIVDNAEVRRVY 257
           +I++II  LK +GIGVLITDHNVRETL IC+ A+I++DG ++A+G  + I+ N  V+ VY
Sbjct: 175 DIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGQLIAEGDSATILANDLVKEVY 234

Query: 258 LGEHFRM 264
           LG  FR+
Sbjct: 235 LGHEFRL 241