Pairwise Alignments

Query, 264 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Variovorax sp. SCN45

Subject, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

 Score =  281 bits (718), Expect = 1e-80
 Identities = 140/247 (56%), Positives = 184/247 (74%), Gaps = 9/247 (3%)

Query: 18  LVARGLKKSYGSRTVVKDVSLDVQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAGDITID 77
           L A+ L KSY  R VV+DVSL +  G++VGLLGPNGAGKTT FYMIVGLV+A+ G + ID
Sbjct: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63

Query: 78  GEPIAHMPIHRRARMGLSYLPQEASIFRKLTVEENVRAVLELQQEPDASGKLMPLSKQHM 137
              ++H P+H RAR G+ YLPQEASIFRKL+V +N+ A+LE +++ D  G+         
Sbjct: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGR--------- 114

Query: 138 EERLSELLADLRVDHLRDSPALALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVI 197
            + L  LL +  + H+RD+  ++LSGGERRRVEIARALAT P+FILLDEPFAG+DPI+V 
Sbjct: 115 RKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVG 174

Query: 198 EIQRIISFLKERGIGVLITDHNVRETLGICDHAFIISDGHVLAQGTPSEIVDNAEVRRVY 257
           +I++II  LK +GIGVLITDHNVRETL IC+ A+I++DG ++A+G    I+ N  V+ VY
Sbjct: 175 DIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVY 234

Query: 258 LGEHFRM 264
           LG  FR+
Sbjct: 235 LGHEFRL 241