Pairwise Alignments

Query, 459 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 454 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  147 bits (372), Expect = 5e-40
 Identities = 104/286 (36%), Positives = 145/286 (50%), Gaps = 9/286 (3%)

Query: 170 VGALLLAAAAAIGFAVRRTLNPLEAIAARWNERSHASLQPIAADDMPRELMPFATALNDL 229
           +G+L+LAA   +  A+   L PL  +AA    R   SL+P+    +P EL P   ALN +
Sbjct: 171 LGSLILAAM--VWLAIGWGLKPLADMAATLRARHSGSLEPMQLTPLPTELEPMQAALNRM 228

Query: 230 LARIRAMLTREQQFAATVAHQLRTPLAGLQLGVTRAAEAGDLESSRQVLGELGNTVQRTA 289
           LA+I+ ML RE++F A  AH++RTPLA L++      EAG     R+ L  L   V RT+
Sbjct: 229 LAQIQEMLGRERRFIADAAHEMRTPLAVLRVHAQNLLEAGTEAERRESLAFLITGVDRTS 288

Query: 290 RMVQQLLALGRLDPEVRGNLSFVPTDLAALAHDVGSTFLEFAASRSITLELDAPAEPVMV 349
           R+V QLL + RL+P   G L+    DLA    +       +  S+ + L  +A   P  V
Sbjct: 289 RLVSQLLTMARLEPSA-GQLTLQTIDLATTVRETLIQLTPWLLSKGLELVFNADDAPYRV 347

Query: 350 RLQPELFSEALGNLLDNALRYTQEGGAVLIGF--DTSPPSIRVSDNGPGVPKELYEAVFE 407
              P   + AL NL+ NA  ++ E G + +    D     + V D GPG+ +   E +FE
Sbjct: 348 TTDPGAINIALTNLVTNAANFSPEHGVITVKLSQDAKRFVLTVDDQGPGIDESQRERLFE 407

Query: 408 RFV-RGQHVAGEGSGLGLAIVRDIAALHGATVTLSQGALGGACVTI 452
            F  RG     EG+GLGL IV  IA   G  V L   A GG   T+
Sbjct: 408 LFYSRGN---PEGAGLGLTIVHTIAQHLGGRVHLENLASGGLRATL 450