Pairwise Alignments

Query, 597 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 2e-37
 Identities = 135/426 (31%), Positives = 209/426 (49%), Gaps = 42/426 (9%)

Query: 193 VAERSRQLEENIGLRLNERTLREQALAGLRAS----EQAQAERLRFFSAANHDLRQPVMA 248
           V ER+ +L       L E   R QA + LR +    EQA   + +F +A +HDL QP+ A
Sbjct: 226 VRERTAELTSLNDQLLREIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNA 285

Query: 249 IGLQAEVLRQQLESGADTHAVQHTVASLARAQQALEGLTNQLLEIGRIEAAVDPLRPEAV 308
             L    L ++ E     H V++   SL    + +E L   L++I +++A V        
Sbjct: 286 ARLFTSALLERDEPQNAAHLVRNVSNSL----EDVENLLGTLVDISKLDAGVIKADVAPF 341

Query: 309 ALAPLLQELA-------RQAGNGRVGVRCPTNAVAWTDTVSLRRVLANLVDNAVKFTPRG 361
           AL  L+  LA       R  G     V C  +AV  +D   L R+L NL+ NA+++TP G
Sbjct: 342 ALHELMDNLAAEYVQVARSEGLELHFVGC--SAVVRSDIQLLARILRNLLSNAIRYTPSG 399

Query: 362 RVLLAVRTRERESGRAWRIEVRDSGIGIPADAQERVFNDFEQIGNVER-NLQRGHGLGLA 420
           RV+L  R   R  G   RIEV DSGIGI  +  + +F +F++ G+V+R +  RG GLGLA
Sbjct: 400 RVVLGCR---RLRGGV-RIEVWDSGIGIAEEHLQDMFLEFKR-GDVQRPDQDRGLGLGLA 454

Query: 421 IVRRLAAQLGIEVALRSAPGRGSVFSFELP---AAPEGAAVARI-RPLPQAGTGASHALP 476
           IV ++A  LG  + +RS  G+GSVF+ E+P    AP+      I  P+ +   GA     
Sbjct: 455 IVEKIAGILGHRIRVRSWLGKGSVFAVEVPLSTTAPKAQPSQVICEPMLERLRGA----- 509

Query: 477 SGLAVLVVEDNAVVADSLLALLRQWGVAPRVYASAAE---ALALADLHA-LDAALCDIRL 532
               V V++++A +   +  LL  WG   RV  + +E   A  + + HA  D  + D  L
Sbjct: 510 ---RVWVLDNDAAICAGMRTLLEGWGC--RVVTALSEEDLARQVDNYHADADLLIADYHL 564

Query: 533 PGALDGIALAERLQ-RQKPSLTIVLISADINEATQRLALERGWHALRKPVQPDELHGVLL 591
               +G+    R+  R+   L  ++I+ + +   ++   E G   + KPV+P +L   + 
Sbjct: 565 DNDCNGVDAVARINARRAQPLPALMITVNYSNDLKQQIRELGHTLMHKPVRPMKLKTAMS 624

Query: 592 KALPRG 597
             L  G
Sbjct: 625 HLLASG 630