Pairwise Alignments

Query, 390 a.a., Secretion protein HlyD from Variovorax sp. SCN45

Subject, 439 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  108 bits (269), Expect = 4e-28
 Identities = 108/366 (29%), Positives = 156/366 (42%), Gaps = 47/366 (12%)

Query: 28  PTESRAGTERPPQPATQ-LGAETLRYPEGAAQLTMIQARAILPSRVPLADVLSARVTYDE 86
           P +S  G E  P+ A     A  +R   G  Q   I+   +    +  A  +   VT++ 
Sbjct: 65  PGKSPMGMEMVPKYADDGEQAGGVRIDPGTVQNLGIRTTPVERRVLSTAVWVPGTVTWNP 124

Query: 87  DVTARIGVGVSGRIVDIKV-APGDTVKAGQVLAEIDSPDFGTAAADLDKAR----ADEER 141
                +   V   I  + V AP   V AG+ LAE+ +P +G+A A+ D  +    AD + 
Sbjct: 125 REATTVSARVDAVINKLWVRAPYTQVTAGEPLAELLAPQWGSALAEYDALQGAQSADAKA 184

Query: 142 KRLAV-ERAKDLVSGDAIPVKEWESLQSDLAQARAETLRAGQRLKNLNPRGLAISGQRVK 200
            R+A  ER + L                 L  A   T R G             +G  + 
Sbjct: 185 LRVAARERLRVL----------------GLTAAEIRTARRG-------------AGAAIT 215

Query: 201 LTSPIDGVVTDRTATPALEVSPGM----AAPLFVVTDPKRLWLMIDLPEKLLGRVRLKSD 256
           L +P  G+VT      ALEV  G        L  +     +W+   LP+ + G V   + 
Sbjct: 216 LDAPQTGMVT------ALEVQEGQRVGAGQTLMTLNSLATVWVEAALPQAVAGTVHSGTP 269

Query: 257 VSVESDAFPGQQFSARIVQLGQVVDVNTRRATARAVLANPRTELLPEMFVRASVLQAEGQ 316
           V+V +DA PGQ F   +  L   +D  TR   AR VLANPR +L P MFV   +    G+
Sbjct: 270 VTVSADALPGQVFQGSVETLLPDLDNATRTQRARIVLANPRAQLSPGMFVTVQLNPVAGE 329

Query: 317 GVR-VPNSAIVNHGVYAYLFVQEAPGEFHRRKVALLTQGGDASYVGEGLKGSELVVVKGA 375
            V  VP+ A++  GV   + V EA G F    V         + + +GL+G E VVV G 
Sbjct: 330 AVAVVPSDALIATGVQTRVIVAEADGRFRPLAVRTGRSADGYTEILDGLQGGEKVVVSGQ 389

Query: 376 LLLDAE 381
            L+D+E
Sbjct: 390 FLIDSE 395