Pairwise Alignments

Query, 1042 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1043 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

 Score =  718 bits (1853), Expect = 0.0
 Identities = 397/1024 (38%), Positives = 608/1024 (59%), Gaps = 19/1024 (1%)

Query: 1    VIDRLIAFSLTQRVFVMVLVAALVGFGAYALSNLPIEAFPDVQDVQVRVISQLPGQAPED 60
            +I+RL+     +R    ++ A +  +G      LPIEA+PD+ DV  +V++Q+PG A E+
Sbjct: 1    MIERLVTLCFHRRGIAWIVFAFVALYGWTCWKQLPIEAYPDIADVTSQVVTQVPGLAAEE 60

Query: 61   MERTVTLPIEREVSGIPKLSNVRSVTMTGLSIVTLTFADGTDDYFARQQVTEKLSTVTLP 120
            +E+ +T+P+ERE+   P L  +RS +  GLS++ + F DG + Y++RQ++ E++S VTLP
Sbjct: 61   VEQQITVPLERELLSTPGLHVLRSKSTFGLSLIVVVFKDGVEGYWSRQRLQERISGVTLP 120

Query: 121  TGVQPQLAPLSTAVGEVYRYTIEGGGLTDAQLRTLQDWTVRPFLRMTPGVADVVSFGGAI 180
             G  P L   ++ +GE+YRYT+E       +L  LQ WTV P L+   GV DV +FGG  
Sbjct: 121  HGATPGLDAYTSPIGEIYRYTLESKTRDLRELSELQSWTVIPRLKKVSGVIDVANFGGLT 180

Query: 181  TEYQVEVDPLALRKYQVTLDQLNQAIGNGNGSAGGGLMRQGDASLVVRSAGLFASLADIR 240
            T++ + +DP  L +Y VTL Q+  AI   NGSAGG LM +G+ + VVR  GL  SL D+ 
Sbjct: 181  TQFMLSLDPARLVQYGVTLQQIKDAINANNGSAGGSLMNRGEQAYVVRGTGLIGSLQDMG 240

Query: 241  SVVIASRQGRAITVADVAEVRAGERPRFGIVAVDARDSVVEGIVSMTKGGNPAKINAELK 300
            +VV+ ++ G  + V D+  +  G   R GI+  D     V GI  + K    +++   + 
Sbjct: 241  NVVVTAKSGTPVLVKDLGTLSYGNVERRGILGKDDNPDTVSGITLLLKDAQASQVIEGVH 300

Query: 301  QRIGQLQAK-LPPGVRIVPVYDRTELVRHTVSTVAENLVVGALLVIAVLIVFLSSWRAAL 359
              +  L    LP  V++VP  DR  L+  T  TV + L  G +LV  VL++ L S RAA 
Sbjct: 301  AAVKDLNDNLLPKDVKVVPYLDRAALIGATTHTVGKTLAEGIVLVTLVLLLSLGSPRAAA 360

Query: 360  IVATVIPLALLFAFILMNARGVSANLISLGAVDFGIIIDSAVVIVEALMVRLAAKSVGDI 419
            IVA  IPL++L AF+ M    V ANL+SLGA+DFGI++D AVV+VE ++ R        +
Sbjct: 361  IVALTIPLSMLIAFVFMRHLNVPANLLSLGAIDFGILVDGAVVLVEGILRRREEAQDKPL 420

Query: 420  ASPEARHQRMGVLHRTLSDLAHPVLFSKAIIILAFVPIFTFQRVEGKIFTPVALTLSFAL 479
               +A    + V        A P+ F   +II A++P+F FQR+E K+F+P+A  +  AL
Sbjct: 421  TPADAIAATVQV--------ARPIFFGMLVIIAAYLPLFAFQRIEYKLFSPMAFAVGSAL 472

Query: 480  LGAVLLTFTLLPTLLSYALQRGTLAEKHKPWLDWLQMRYRKLVMFTMRRGRVTLLLSAVP 539
            +GA+L+  TL+P L   A ++      ++P L+WL +RY   +   + RGR  +    + 
Sbjct: 473  VGALLVALTLIPGLAYLAFRKPGRVFHNRP-LEWLTLRYEAFLSRVLGRGRWVVATCGLA 531

Query: 540  VALALLLAPRLGSEFLPKLDEGNIWLTVTLPTSAALETTKEVEHVVRAKLLAYPEVARVI 599
            +   + L   +G +FLP LDEG++WL VT+P    LE    + + +R+    +PEV+ ++
Sbjct: 532  LLGVIGLGGTIGRDFLPYLDEGSLWLQVTMPPGITLEKATALANELRSATREFPEVSYIV 591

Query: 600  AQVGRPDDGSDPKGPNNLEILVDLKPREQWRFA-SKEDLVASMSAQLDGIPGISANFSQV 658
             Q GR DDG+DP   +++E  V L P + W+   SK++L+  ++ +   +PG S  F Q 
Sbjct: 592  TQTGRNDDGTDPWTVSHIEASVGLHPYDTWKSGMSKQELIGKLAERYKQLPGFSVGFMQP 651

Query: 659  IQDNVEEALSGFRGEIVAKIIGNNLDILDDKGAEVASVIKGIRGATDVDATRIGGQTEVV 718
            + D V++ LSG   ++V KI G++LD +     +V  V++ + GA DV   +      + 
Sbjct: 652  MIDGVQDKLSGAHSDLVVKIYGDSLDEMRRIAGDVIGVLEKVPGAADVVIDQEPPLPNLK 711

Query: 719  ITPDRARLARYGMAINDVNTLVNQAMSGTSVTGFYDADKRFDVVVRVGDRHRNSVDAIAG 778
            I  DRA  ARYG+ + DV+ L++  M G ++   Y  +K +D+ VR  +  RN  DAIAG
Sbjct: 712  IDVDRAAAARYGINVADVSDLISTGMGGAAIGQVYVGEKSYDMTVRFPEATRNDPDAIAG 771

Query: 779  LQLAVPGTQSGNGPGTIALGDVATIEVKQGASRIFRESGSRMVIVKVNLLGRDQGSFVEE 838
            L L  P     NG   + LG VA++    G + I RES  R + VK+N  GRD  SF+ +
Sbjct: 772  LMLTAP-----NG-AKVPLGQVASVRTVSGETTITRESSRRHLTVKLNARGRDLSSFLAQ 825

Query: 839  AQRTVAEQVKLPP-GYELTWGGQFENSQRAAKRLMVIVPLTALLIFSLLFWAFRSVRLAG 897
            AQ  +   VK     Y++ WGGQFEN +RA  RLMVI+PLT  ++F LLF  F ++R   
Sbjct: 826  AQSAIERGVKYDHLRYQIAWGGQFENLERAQARLMVILPLTLAIMFLLLFAEFGNLRQPA 885

Query: 898  LVLGMIPFTLVGGLAALALADLHLSVSAAVGFIAVAGISVQNGVILVEEVTQ-RVRDGSA 956
            +VL ++P  ++GGLAAL L  + L+VS+AVGFIA+ G++V NGV+++ ++ + R  DG  
Sbjct: 886  MVLLVVPLAMLGGLAALHLRGMTLNVSSAVGFIALFGVAVLNGVLMISQINRLRREDGRP 945

Query: 957  VARAIVEGAAVRLRPILMTALMAGLGLLPAALSHGIGSETQRPFACVIVGGIVSGTLFTL 1016
            +  A++EGA  R+RP+L+TA +A  GL PA L+ G+GS+ QRP A V+VGG+V+ TL TL
Sbjct: 946  LREAVIEGARSRIRPVLVTATVAAFGLTPAMLAMGLGSDVQRPLATVVVGGLVTATLLTL 1005

Query: 1017 LVLP 1020
            ++LP
Sbjct: 1006 VLLP 1009



 Score = 62.8 bits (151), Expect = 1e-13
 Identities = 84/366 (22%), Positives = 145/366 (39%), Gaps = 50/366 (13%)

Query: 164  LRMTPGVADVV-SFGGAITEYQVEVDPLALRKYQVTLDQLNQAIGNGNGSAGGGLMRQGD 222
            L   PG ADVV      +   +++VD  A  +Y + +  ++  I  G G A  G +  G+
Sbjct: 690  LEKVPGAADVVIDQEPPLPNLKIDVDRAAAARYGINVADVSDLISTGMGGAAIGQVYVGE 749

Query: 223  AS--LVVRSAGLFASLAD-IRSVVIASRQGRAITVADVAEVRAGERPRFGIVAVDARDSV 279
             S  + VR      +  D I  +++ +  G  + +  VA VR                  
Sbjct: 750  KSYDMTVRFPEATRNDPDAIAGLMLTAPNGAKVPLGQVASVRT----------------- 792

Query: 280  VEGIVSMTKGGN----PAKINA---ELKQRIGQLQAKLPPGVRIVPVYDRTELVR----- 327
            V G  ++T+  +      K+NA   +L   + Q Q+ +  GV+    YD           
Sbjct: 793  VSGETTITRESSRRHLTVKLNARGRDLSSFLAQAQSAIERGVK----YDHLRYQIAWGGQ 848

Query: 328  -HTVSTVAENLVVGALLVIAVLIVFL----SSWRAALIVATVIPLALLFAFILMNARGVS 382
               +      L+V   L +A++ + L     + R   +V  V+PLA+L     ++ RG++
Sbjct: 849  FENLERAQARLMVILPLTLAIMFLLLFAEFGNLRQPAMVLLVVPLAMLGGLAALHLRGMT 908

Query: 383  ANLISLGAVDFGIIIDSAVVIVEALMVRLAAKSVGDIASPEARHQRMGVLHRTLSDLAHP 442
             N+ S  AV F I +    V+   LM+      +  +   + R  R  V+    S +  P
Sbjct: 909  LNVSS--AVGF-IALFGVAVLNGVLMI----SQINRLRREDGRPLREAVIEGARSRI-RP 960

Query: 443  VLFSKAIIILAFVPIFTFQRVEGKIFTPVALTLSFALLGAVLLTFTLLPTLLSYALQRGT 502
            VL +  +      P      +   +  P+A  +   L+ A LLT  LLP L      R  
Sbjct: 961  VLVTATVAAFGLTPAMLAMGLGSDVQRPLATVVVGGLVTATLLTLVLLPALYHLVETRAE 1020

Query: 503  LAEKHK 508
             A + +
Sbjct: 1021 AAARRR 1026