Pairwise Alignments

Query, 1042 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

 Score =  731 bits (1887), Expect = 0.0
 Identities = 408/1065 (38%), Positives = 639/1065 (60%), Gaps = 38/1065 (3%)

Query: 1    VIDRLIAFSLTQRVFVMVLVAALVGFGAYALSNLPIEAFPDVQDVQVRVISQLPGQAPED 60
            + +R+I F++ QR+ VM+ V  + G G Y+   LPI+A PD+ +VQV++ +  PG +P +
Sbjct: 1    MFERIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60

Query: 61   MERTVTLPIEREVSGIPKLSNVRSVTMTGLSIVTLTFADGTDDYFARQQVTEKLSTVT-- 118
             E+ +T P+E  ++G+P L   RS++ +GLS VT+ F DGTD +FARQ + E+L      
Sbjct: 61   TEQRITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQ 120

Query: 119  LPTGVQPQLAPLSTAVGEVYRYTIE---------GGGLTDAQLRTLQDWTVRPFLRMTPG 169
            LP GV+  + P+ST +GE++ +T+E         G   T   LR +QDW ++P LR  PG
Sbjct: 121  LPEGVEAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVPG 180

Query: 170  VADVVSFGGAITEYQVEVDPLALRKYQVTLDQLNQAIGNGNGSAGGGLMRQGDASLVVRS 229
            VA++ + GG   ++ V  DP  L  Y++TL+ L  A+ + N + G G + +    L++R+
Sbjct: 181  VAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIRA 240

Query: 230  AGLFASLADIRSVVIASRQGRAITVADVAEVRAGERPRFGIVAVDARDSVVEGIVSMTKG 289
             G   ++ DI ++VI S  G  I ++ VA+V  G+  R G    + R+ VV G V M  G
Sbjct: 241  PGQVGNIEDIANIVITSVDGAPIRISSVADVSIGKELRTGAATENGRE-VVLGTVFMLIG 299

Query: 290  GNPAKINAELKQRIGQLQAKLPPGVRIVPVYDRTELVRHTVSTVAENLVVGALLVIAVLI 349
             N   ++  +  ++  +   LP GV  V VYDRT LV   ++TV +NLV GA+LVIA+L 
Sbjct: 300  ENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAILF 359

Query: 350  VFLSSWRAALIVATVIPLALLFAFILMNARGVSANLISLGAVDFGIIIDSAVVIVEALMV 409
            +FL + RAALI A VIPL++LF F  M    VSANL+SLGA+DFGII+D AVVIVE  + 
Sbjct: 360  LFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLGALDFGIIVDGAVVIVENAIR 419

Query: 410  RLAAKSVGDIASPEARHQRMGVLHRT---------LSDLAHPVLFSKAIIILAFVPIFTF 460
            RLA           A+H+   +L +T           +   P++F + II++ ++PIF  
Sbjct: 420  RLA----------HAQHKHGRMLTKTERFHEVFAAAREARRPLIFGQLIIMVVYLPIFAL 469

Query: 461  QRVEGKIFTPVALTLSFALLGAVLLTFTLLPTLLSYALQRGTLAEKHKPWLDWLQMRYRK 520
              VEGK+F P+A T+  ALLGA++L+ T +P  ++  +  G + E+    +   ++RY  
Sbjct: 470  TGVEGKMFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVT-GKVKEEEGVVMRTARLRYEP 528

Query: 521  LVMFTMRRGRVTLLLSAVPVALALLLAPRLGSEFLPKLDEGNIWL-TVTLPTSAALETTK 579
            ++ + +    +    +   V L+ LLA R+GSEF+P L EG+  +  + +P ++  ++ +
Sbjct: 529  VLQWVLGHRNIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVE 588

Query: 580  EVEHVVRAKLLAYPEVARVIAQVGRPDDGSDPKGPNNLEILVDLKPREQWRFASK--EDL 637
              + + +A +   PEV R+ A+ G  +  SDP  PN  +  + LKP++QW    K  ++L
Sbjct: 589  MQQRLEKAVIAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDEL 648

Query: 638  VASMSAQLDGIPGISANFSQVIQDNVEEALSGFRGEIVAKIIGNNLDILDDKGAEVASVI 697
            +A +     G+PG +   SQ IQ    E +SG R ++  K+ G+++D+L++   ++A+ +
Sbjct: 649  IAEVQKAAAGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAAL 708

Query: 698  KGIRGATDVDATRIGGQTEVVITPDRARLARYGMAINDVNTLVNQAMSGTSVTGFYDADK 757
            K + G+++V   +  G   + I  DR + ARYG+ I DV   +  A+ G      Y+ D+
Sbjct: 709  KAVPGSSEVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYEGDR 768

Query: 758  RFDVVVRVGDRHRNSVDAIAGLQLAVPGT--QSGNGPGTIALGDVATIEVKQGASRIFRE 815
            RFD+VVR+ +  R  V  ++ L + VP    Q  N  G I L  VA ++++ G ++I RE
Sbjct: 769  RFDMVVRLPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISRE 828

Query: 816  SGSRMVIVKVNLLGRDQGSFVEEAQRTVAEQVKLPPGYELTWGGQFENSQRAAKRLMVIV 875
            +G R+VIV  N+ GRD GSFVEEA  ++ ++V++P GY  TWGGQFE  Q AAKRL ++V
Sbjct: 829  NGKRLVIVSANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFEQLQSAAKRLQIVV 888

Query: 876  PLTALLIFSLLFWAFRSVRLAGLVLGMIPFTLVGGLAALALADLHLSVSAAVGFIAVAGI 935
            P+  LL+ +LLF  F +++   LV   IPF L GG+ AL L D+ LS+SA VGFIA++G+
Sbjct: 889  PVALLLVMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGV 948

Query: 936  SVQNGVILVEEVTQRVRDGSAVARAIVEGAAVRLRPILMTALMAGLGLLPAALSHGIGSE 995
            +V NG++++  +     +G  + +A+ EGA  RLRP+LMTAL+A LG +P AL+ G G+E
Sbjct: 949  AVLNGLVMIAFIRGLREEGRTLRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTGAE 1008

Query: 996  TQRPFACVIVGGIVSGTLFTLLVLPLAIGMFGNFYDETEEAAEPV 1040
             QRP A V++GGI+S T  TLLVLP A+  + +  DE  + AE V
Sbjct: 1009 VQRPLATVVIGGILSSTALTLLVLP-ALYHWAHRKDEDGDEAEVV 1052