Pairwise Alignments
Query, 1042 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45
Subject, 1443 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 695 bits (1794), Expect = 0.0
Identities = 380/1036 (36%), Positives = 622/1036 (60%), Gaps = 22/1036 (2%)
Query: 1 VIDRLIAFSLTQRVFVMVLVAALVGFGAYALSNLPIEAFPDVQDVQVRVISQLPGQAPED 60
++ +LI +SL ++ +++ ++GFG YAL+++P+ A PD+ + QV+VI+ A ED
Sbjct: 1 MLQKLIQYSLQHKLVILLFTLGILGFGLYALTHIPLGAVPDITNNQVQVITTSKNLATED 60
Query: 61 MERTVTLPIEREVSGIPKLSNVRSVTMTGLSIVTLTFADGTDDYFARQQVTEKLSTVT-- 118
+E+ +T P+E E++ +P + +RSV+ GLSIVT+ F D Y RQ + EKL
Sbjct: 61 VEKFLTYPVELEMANLPNVKEIRSVSKFGLSIVTVVFDDKAGTYLPRQLIAEKLKLAEER 120
Query: 119 LPTGV-QPQLAPLSTAVGEVYRYTIE-----GGGLTDAQLRTLQDWTVRPFLRMTPGVAD 172
+P G P + P+ST +GE+Y+Y I+ G + A LRT+QDW +R L PGV +
Sbjct: 121 IPEGFGSPFMGPISTGLGEIYQYIIDVAPEYKGEYSTADLRTIQDWIIRRQLSGIPGVVE 180
Query: 173 VVSFGGAITEYQVEVDPLALRKYQVTLDQLNQAIGNGNGSAGGGLMRQGDASLVVRSAGL 232
+ ++GG + +Y+V VDP LR + L +L + + N AGGG + + + + VR GL
Sbjct: 181 INTWGGYLKQYEVAVDPEKLRAMNIPLRKLYTVLRDNNSIAGGGYIEKTEETYFVRGEGL 240
Query: 233 FASLADIRSVVIASRQGRAITVADVAEVRAGERPRFGIVAVDARDSVVEGIVSMTKGGNP 292
SL DI ++V+ +R G + V+DVAEVR G RFG + + V G V M KG +
Sbjct: 241 VESLEDIGNIVVENRNGVPVYVSDVAEVRFGHATRFGAITGNGEGEKVLGQVMMLKGADS 300
Query: 293 AKINAELKQRIGQLQAKLPPGVRIVPVYDRTELVRHTVSTVAENLVVGALLVIAVLIVFL 352
+ + +R+ ++ LPPG+ I P +R+EL+ T T+AENL++G L+VI V+++ L
Sbjct: 301 QAVINAVAERVEAIKPSLPPGIIINPFLERSELIGKTTFTIAENLILGCLIVIFVVVLLL 360
Query: 353 SSWRAALIVATVIPLALLFAFILMNARGVSANLISLGAVDFGIIIDSAVVIVEALMVRLA 412
+ R+AL+VA+VIPL LLFA LM GV ANL+SLGA+DFGIIID AV+IVE + ++
Sbjct: 361 GNLRSALVVASVIPLCLLFALSLMYLTGVDANLMSLGAIDFGIIIDGAVIIVEFIAYQIT 420
Query: 413 AKSVGDIASPEARHQRMGVLHRTL---SDLAHPVLFSKAIIILAFVPIFTFQRVEGKIFT 469
A++ + + + +++ + T S + H +F + III+ F+PI + VEGK+F
Sbjct: 421 AQN-ASLIGLKGKERQVAIDRITFLGASKMMHSAVFGQLIIIIVFIPILSLVNVEGKMFR 479
Query: 470 PVALTLSFALLGAVLLTFTLLPTLLSYALQ--RGTLAEKHKPWLDWLQMRYRKLVMFTMR 527
P+A+ +AL+GA++L FT +P + + ++ + + A + + Y+ + +++R
Sbjct: 480 PMAMVFCYALVGAMVLCFTYVPVMSALFIKPSKKSGANISVKLIAAVYRIYQPAIYWSLR 539
Query: 528 RGRVTLLLSAVPVALALLLAPRLGSEFLPKLDEGNIWLTVTLPTSAALETTKEVEHVVRA 587
++ L ++ + LA LL R+G EF+P LDEG+ + L T +L+ T E +
Sbjct: 540 HKKMVLSMAGGLLLLAGLLFFRMGGEFVPTLDEGDFVIQPVLKTGTSLQKTIETTTKMEK 599
Query: 588 KLLAYPEVARVIAQVGRPDDGSDPKGPNNLEILVDLKPREQWRFA-SKEDLVASMSAQLD 646
LL +PEV +V+ ++G + +DP ++++ L P+E+W A +K+ L + L
Sbjct: 600 ILLGFPEVDQVVTRIGAAEVPTDPMSMEESDVIIKLHPKEEWVTAETKDGLADAFKTALS 659
Query: 647 GIPGISANFSQVIQDNVEEALSGFRGEIVAKIIGNNLDILDDKGAEVASVIKGIRGATDV 706
+PGI F+Q I+ E ++G R ++ KI G +LD+L K EV + I+ + GA+D+
Sbjct: 660 ILPGIDFEFTQPIEMRFNELITGVRADLAIKIFGEDLDLLYQKALEVETAIQQVEGASDI 719
Query: 707 DATRIGGQTEVVITPDRARLARYGMAINDVNTLVNQAMSGTSVTGFYDADKRFDVVVRVG 766
+ G ++ + DR ++A+YG+ ++ +N L++ +G ++ +K+FD+V+R
Sbjct: 720 IVEKTAGLPQMSVNYDRRKIAKYGLNVSALNELISMGFAGLPAGTVFEGEKQFDLVLRFD 779
Query: 767 DRHRNSVDAIAGLQLAVPGTQSGNGPGTIALGDVATIEVKQGASRIFRESGSRMVIVKVN 826
HR S++ I + +P S + L + A+I G ++I R+ R ++V VN
Sbjct: 780 PEHRKSLEDIQSASVQLPNGHS------LPLSEFASIGFTTGPAKISRDDTKRRIVVGVN 833
Query: 827 LLGRDQGSFVEEAQRTVAEQVKLPPGYELTWGGQFENSQRAAKRLMVIVPLTALLIFSLL 886
+ RD S VE+ ++ + E+++LP GY +T+GGQFEN + A +RLMV VP+ LLIF +L
Sbjct: 834 VRNRDLESVVEDVRKIIEEKIELPTGYSVTYGGQFENLRTARERLMVAVPIALLLIFVML 893
Query: 887 FWAFRSVRLAGLVLGMIPFTLVGGLAALALADLHLSVSAAVGFIAVAGISVQNGVILVEE 946
++AF S++ A ++ IP VGG+ L L S+SA VGFIA+ GI+V NG++L+EE
Sbjct: 894 YFAFGSIKEAFIIYSAIPLAAVGGVFLLYFRGLPFSISAGVGFIALFGIAVLNGIVLIEE 953
Query: 947 VTQRVRDG-SAVARAIVEGAAVRLRPILMTALMAGLGLLPAALSHGIGSETQRPFACVIV 1005
+ G V +A++ G RLRP+L+TA A LG LP A+SH G+E QRP A V+V
Sbjct: 954 FKELRDQGIKNVHKAVLIGTKKRLRPVLLTASAAALGFLPMAVSHSAGAEVQRPLATVVV 1013
Query: 1006 GGIVSGTLFTLLVLPL 1021
GG+V+ TL TLLV+P+
Sbjct: 1014 GGLVTATLLTLLVVPV 1029
Score = 62.8 bits (151), Expect = 2e-13
Identities = 112/481 (23%), Positives = 197/481 (40%), Gaps = 80/481 (16%)
Query: 39 FPDVQDVQVRVISQLPGQAPEDMERTVTLPIEREVSGIPKLSNVRSVTMTGLSIV---TL 95
FP+V V R+ + P ME + + + PK V + T GL+ L
Sbjct: 604 FPEVDQVVTRIGAAEVPTDPMSMEESDVI-----IKLHPKEEWVTAETKDGLADAFKTAL 658
Query: 96 TFADGTDDYFARQQVTEKLSTVTLPTGVQPQLAPLSTAVGEVYRYTIEGGGLTDAQLRTL 155
+ G D F Q + + + L TGV+ LA I G L + L
Sbjct: 659 SILPGIDFEFT-QPIEMRFNE--LITGVRADLA-----------IKIFGEDLDLLYQKAL 704
Query: 156 QDWTVRPFLRMTPGVADV-VSFGGAITEYQVEVDPLALRKYQVTLDQLNQAIGNGNGSAG 214
+ V ++ G +D+ V + + V D + KY + + LN+ I G
Sbjct: 705 E---VETAIQQVEGASDIIVEKTAGLPQMSVNYDRRKIAKYGLNVSALNELISMGFAGLP 761
Query: 215 GGLMRQGDAS--LVVR-SAGLFASLADIRSVVIASRQGRAITVADVAEVRAGERP----- 266
G + +G+ LV+R SL DI+S + G ++ +++ A + P
Sbjct: 762 AGTVFEGEKQFDLVLRFDPEHRKSLEDIQSASVQLPNGHSLPLSEFASIGFTTGPAKISR 821
Query: 267 ----RFGIVAVDARDSVVEGIVSMTKGGNPAKINAELKQRIGQLQAKLPPGVRIVPVYDR 322
R +V V+ R+ +E +V E ++I + + +LP G + +
Sbjct: 822 DDTKRRIVVGVNVRNRDLESVV-------------EDVRKIIEEKIELPTGYSVT-YGGQ 867
Query: 323 TELVRHTVSTVAENLVVG---ALLVIAVLIVF-LSSWRAALIVATVIPLALLFAFILMNA 378
E +R T E L+V ALL+I V++ F S + A I+ + IPLA + L+
Sbjct: 868 FENLR----TARERLMVAVPIALLLIFVMLYFAFGSIKEAFIIYSAIPLAAVGGVFLLYF 923
Query: 379 RGVSANLIS-LGAVD-FGIIIDSAVVIVEALMVRLAAKSVGDIASPEARHQRMGVLHRTL 436
RG+ ++ + +G + FGI + + +V++E E R Q + +H+ +
Sbjct: 924 RGLPFSISAGVGFIALFGIAVLNGIVLIEEFK--------------ELRDQGIKNVHKAV 969
Query: 437 ----SDLAHPVLFSKAIIILAFVPIFTFQRVEGKIFTPVALTLSFALLGAVLLTFTLLPT 492
PVL + + L F+P+ ++ P+A + L+ A LLT ++P
Sbjct: 970 LIGTKKRLRPVLLTASAAALGFLPMAVSHSAGAEVQRPLATVVVGGLVTATLLTLLVVPV 1029
Query: 493 L 493
L
Sbjct: 1030 L 1030