Pairwise Alignments
Query, 1042 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45
Subject, 1052 a.a., Cobalt-zinc-cadmium resistance protein CzcA from Acinetobacter radioresistens SK82
Score = 665 bits (1717), Expect = 0.0
Identities = 389/1037 (37%), Positives = 608/1037 (58%), Gaps = 30/1037 (2%)
Query: 1 VIDRLIAFSLTQRVFVMVLVAALVGFGAYALSNLPIEAFPDVQDVQVRVISQLPGQAPED 60
+ DRLI FS+ ++VM+ +AA + G Y+ LPI+A PD+ + QV++ + G +
Sbjct: 19 LFDRLIQFSIHNAIWVMLFIAAWIAIGIYSYQKLPIDAVPDITNTQVQINTSANGFTALE 78
Query: 61 MERTVTLPIEREVSGIPKLSNVRSVTMTGLSIVTLTFADGTDDYFARQQVTEKLSTVT-- 118
ME+ +T PIE +SG+PK+ RS++ GLS VT+ F DGTD Y+ARQ + ++L
Sbjct: 79 MEQRITYPIENAMSGMPKMEQTRSISRYGLSQVTIIFEDGTDIYWARQLINQRLQEAMGE 138
Query: 119 LPTGVQPQLAPLSTAVGEVYRYTI---------EGGGLTDAQLRTLQDWTVRPFLRMTPG 169
+P VQP ++P+ST +GE+Y++ I +G + LR +QDW VRP L+ G
Sbjct: 139 MPEDVQPNMSPISTGLGEIYQWVIKAEPNAKKPDGTPYSAMDLREIQDWIVRPQLQRVKG 198
Query: 170 VADVVSFGGAITEYQVEVDPLALRKYQVTLDQLNQAIGNGNGSAGGGLMRQGDASLVVRS 229
VA++ S GG Y V D L++ Q+ L L A+ N + G G + + L VR
Sbjct: 199 VAEINSIGGFNKTYVVAPDLNRLQQLQIPLSDLQTALTENNENRGAGYIEKNGQQLTVRV 258
Query: 230 AGLFASLADIRSVVIASRQGRAITVADVAEVRAGERPRFGIVAVDARDSVVEGIVSMTKG 289
G ++ DI+++ IA++ G I VADVA V G R G + ++V+ GI M G
Sbjct: 259 PGTLNTIEDIQNISIANKNGYPIRVADVANVSIGHDLRTGAATYNGEETVL-GIAMMMMG 317
Query: 290 GNPAKINAELKQRIGQLQAKLPPGVRIVPVYDRTELVRHTVSTVAENLVVGALLVIAVLI 349
N + + +++ +Q LP GV I VYDRT LV + TV +NL+ GA+LVI +L
Sbjct: 318 ENSRTVAQAIDEKVQSIQQSLPKGVVIETVYDRTHLVDRAIKTVQKNLIEGAILVIVILF 377
Query: 350 VFLSSWRAALIVATVIPLALLFAFILMNARGVSANLISLGAVDFGIIIDSAVVIVEALMV 409
+FL ++RAALI A VIPL++LF M + +SANL+SLGA+DFGIIID AVVIVE +
Sbjct: 378 LFLGNFRAALITACVIPLSMLFTLTGMAEQKISANLMSLGALDFGIIIDGAVVIVENCIR 437
Query: 410 RL--AAKSVGDIASPEARHQRMGVLHRTLSDLAHPVLFSKAIIILAFVPIFTFQRVEGKI 467
RL A K G + S R +R + P++F + II++ ++PIFT VE K+
Sbjct: 438 RLAEAQKLKGGLLS---RSERFKEVFLAAKQARRPLIFGQLIILVVYLPIFTLTGVEAKL 494
Query: 468 FTPVALTLSFALLGAVLLTFTLLPTLLSYALQRGTLAEKHKPWLDWLQMRYRKLVMFTMR 527
F P+A+T+ AL+GA++L+ T +P ++ + G + E W+ WL+ +Y L+
Sbjct: 495 FHPMAMTVVLALIGAMILSVTFVPAAVALFV-TGEVKETESRWMHWLKTKYELLLDKAYE 553
Query: 528 RGRVTLLLSAVPVALALLLAPRLGSEFLPKLDEGNIWLTVTLPTSAALETTKEV-EHVVR 586
+++A + L +LA + GSEF P+L EG+ + S LE + + E+ +
Sbjct: 554 LRLFVTIVAACILVLTGVLATQTGSEFAPQLGEGDFAVQQMRSPSTGLEQSLRMQENTEK 613
Query: 587 AKLLAYPEVARVIAQVGRPDDGSDPKGPNNLEILVDLKPREQWRFASK--EDLVASMSAQ 644
L +PE+ + A+ G + +D PN + +V LKP ++W + ++L M
Sbjct: 614 LLLKEFPEIKAIFARTGTAEVATDVMPPNISDGVVLLKPHDEWPDPKQTIDELRQRMITF 673
Query: 645 LDGIPGISANFSQVIQDNVEEALSGFRGEIVAKIIGNNLDILDDKGAEVASVIKGIRGAT 704
L +PG ++ FSQ I+ E +SG R ++ K+ G++++IL+ + +++ I I GAT
Sbjct: 674 LATLPGNNSEFSQPIELRFNELISGVRSDVGVKLFGDDMEILNREANKISQKINSISGAT 733
Query: 705 DVDATRIGGQTEVVITPDRARLARYGMAINDVNTLVNQAMSGTSVTGFYDADKRFDVVVR 764
V+ + G + + D++R A+YG+++ + LV ++ G +V DKRFD V+R
Sbjct: 734 AVNVEQTSGLPLLNVEVDKSRAAQYGLSVRAIQDLVATSVGGQNVGTILQGDKRFDFVIR 793
Query: 765 VGDRHRNSVDAIAGLQLAVPGTQSGNGPGTIALGDVATIEVKQGASRIFRESGSRMVIVK 824
+ + R+ QLAV Q NG G + L DVA +E G +++ RE+G R V++
Sbjct: 794 LDESQRSPE------QLAVLPIQLPNG-GLVQLQDVARVENILGINQVSRENGKRRVVIT 846
Query: 825 VNLLGRDQGSFVEEAQRTVAEQVKLPPGYELTWGGQFENSQRAAKRLMVIVPLTALLIFS 884
N+ GRD GSFV E Q T+++Q +LP GY + +GGQF+N A R+ ++VPL L IF
Sbjct: 847 ANVEGRDLGSFVTELQSTLSKQ-ELPSGYWIDYGGQFQNLMSAKARMQLVVPLALLTIFI 905
Query: 885 LLFWAFRSVRLAGLVLGMIPFTLVGGLAALALADLHLSVSAAVGFIAVAGISVQNGVILV 944
LL F +++ + LV +PF L GGL AL L D+ LS+SA VGFIA++G++V NG++++
Sbjct: 906 LLMAVFHNIKESLLVFSGVPFALCGGLIALWLRDIPLSMSAGVGFIALSGVAVLNGLVML 965
Query: 945 EEVTQRVRDGSAVARAIVEGAAVRLRPILMTALMAGLGLLPAALSHGIGSETQRPFACVI 1004
+ + +R + A +GA +RLRP+LMTA +A LG +P AL+ G G+E QRP A V+
Sbjct: 966 TFI-KELRQQYDLYYATWQGAILRLRPVLMTACVASLGFVPMALATGTGAEVQRPLATVV 1024
Query: 1005 VGGIVSGTLFTLLVLPL 1021
+GGI+S TL TL++LP+
Sbjct: 1025 IGGIISSTLLTLVLLPV 1041
Score = 53.9 bits (128), Expect = 6e-11
Identities = 101/538 (18%), Positives = 228/538 (42%), Gaps = 62/538 (11%)
Query: 518 YRKLVMFTMRRGRVTLLLSAVPVALALLLAPRLGSEFLPKLDEGNIWLTVTLPTSAALET 577
+ +L+ F++ +L A +A+ + +L + +P + + + + ALE
Sbjct: 20 FDRLIQFSIHNAIWVMLFIAAWIAIGIYSYQKLPIDAVPDITNTQVQINTSANGFTALEM 79
Query: 578 TKEVEHVVRAKLLAYP--EVARVIAQVGRP------DDGSDPKGPNNLEILVDLKPREQW 629
+ + + + + P E R I++ G +DG+D L + R Q
Sbjct: 80 EQRITYPIENAMSGMPKMEQTRSISRYGLSQVTIIFEDGTDIYWARQL-----INQRLQE 134
Query: 630 RFASK-EDLVASMSAQLDGIPGISANFSQVIQDNVEEALSGFRGEIVAKIIGNNLDILDD 688
ED+ +MS IS ++ Q ++ + + + + +D+ +
Sbjct: 135 AMGEMPEDVQPNMSP-------ISTGLGEIYQWVIKAEPNAKKPDGTPY---SAMDLREI 184
Query: 689 KGAEVASVIKGIRGATDVDATRIGGQTEV-VITPDRARLARYGMAINDVNTLVNQAMSGT 747
+ V ++ ++G ++++ IGG + V+ PD RL + + ++D+ T + +
Sbjct: 185 QDWIVRPQLQRVKGVAEINS--IGGFNKTYVVAPDLNRLQQLQIPLSDLQTALTENNENR 242
Query: 748 SVTGFYDADKRFDVVVRVGDRHRNSVDAIAGLQLAVPGTQSGNGPGTIALGDVATIEV-- 805
G+ + + + + VRV N+++ I + +A + NG I + DVA + +
Sbjct: 243 GA-GYIEKNGQ-QLTVRVPGT-LNTIEDIQNISIA-----NKNGY-PIRVADVANVSIGH 293
Query: 806 --KQGASRIFRESGSRMVI-VKVNLLGRDQGSFVEEAQRTVAE-QVKLPPGYEL-TWGGQ 860
+ GA+ +G V+ + + ++G + + + V Q LP G + T +
Sbjct: 294 DLRTGAATY---NGEETVLGIAMMMMGENSRTVAQAIDEKVQSIQQSLPKGVVIETVYDR 350
Query: 861 FENSQRAAKRLMVIVPLTALLIFSLLFWAFRSVRLAGLVLGMIPFTLVGGLAALALADLH 920
RA K + + A+L+ +LF + R A + +IP +++ L +A +
Sbjct: 351 THLVDRAIKTVQKNLIEGAILVIVILFLFLGNFRAALITACVIPLSMLFTLTGMAEQKIS 410
Query: 921 LSVSA--AVGFIAVAGISVQNGVILVEEVTQRVRD-----GSAVARA-----IVEGAAVR 968
++ + A+ F GI + V++VE +R+ + G ++R+ + A
Sbjct: 411 ANLMSLGALDF----GIIIDGAVVIVENCIRRLAEAQKLKGGLLSRSERFKEVFLAAKQA 466
Query: 969 LRPILMTALMAGLGLLPAALSHGIGSETQRPFACVIVGGIVSGTLFTLLVLPLAIGMF 1026
RP++ L+ + LP G+ ++ P A +V ++ + ++ +P A+ +F
Sbjct: 467 RRPLIFGQLIILVVYLPIFTLTGVEAKLFHPMAMTVVLALIGAMILSVTFVPAAVALF 524
Score = 46.2 bits (108), Expect = 1e-08
Identities = 66/318 (20%), Positives = 127/318 (39%), Gaps = 32/318 (10%)
Query: 185 VEVDPLALRKYQVTLDQLNQAIGNGNGSAGGGLMRQGDA--SLVVRSAGLFASLADIRSV 242
VEVD +Y +++ + + G G + QGD V+R S + +
Sbjct: 748 VEVDKSRAAQYGLSVRAIQDLVATSVGGQNVGTILQGDKRFDFVIRLDESQRSPEQLAVL 807
Query: 243 VIASRQGRAITVADVAEVRAGERPRFGIVAVDARDSVVEGIVSMT-KGGNPAKINAELKQ 301
I G + + DVA V GI V + +++ +G + EL+
Sbjct: 808 PIQLPNGGLVQLQDVARVEN----ILGINQVSRENGKRRVVITANVEGRDLGSFVTELQS 863
Query: 302 RIGQLQAKLPPGVRIVPVYDRTELVRHTVSTVAENLVVGALLVIAVLIVFLSSW---RAA 358
+ + + LP G I D ++ +S A +V L ++ + I+ ++ + + +
Sbjct: 864 TLSKQE--LPSGYWI----DYGGQFQNLMSAKARMQLVVPLALLTIFILLMAVFHNIKES 917
Query: 359 LIVATVIPLALLFAFILMNARGVSANLISLGAVDFGIIIDSAVVIVEALMVRLAAKSVGD 418
L+V + +P AL I + R + ++ + G I S V ++ L++ K +
Sbjct: 918 LLVFSGVPFALCGGLIALWLRDIPLSM----SAGVGFIALSGVAVLNGLVMLTFIKEL-- 971
Query: 419 IASPEARHQRMGVLHRTLSDLA---HPVLFSKAIIILAFVPIFTFQRVEGKIFTPVALTL 475
Q+ + + T PVL + + L FVP+ ++ P+A +
Sbjct: 972 -------RQQYDLYYATWQGAILRLRPVLMTACVASLGFVPMALATGTGAEVQRPLATVV 1024
Query: 476 SFALLGAVLLTFTLLPTL 493
++ + LLT LLP L
Sbjct: 1025 IGGIISSTLLTLVLLPVL 1042