Pairwise Alignments

Query, 521 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  149 bits (375), Expect = 3e-40
 Identities = 132/501 (26%), Positives = 225/501 (44%), Gaps = 59/501 (11%)

Query: 18  AVWLGGCAVGPDYARPALAASEGFSPKPLPEVTASAPVAAGGAQRFVRTQDIQAEWWKLF 77
           A+ L  CAVGPDY  PA   ++         +++     A    RF      ++ WWK F
Sbjct: 13  ALALAACAVGPDYQAPATEPAQ---------LSSDVQAKAYDRSRF------ESLWWKQF 57

Query: 78  QSKALDAVIEKAFAANPTVESAQAALRIAQENVRAQRGFFYPTVQASYSPARTKIAGNLG 137
               L+ +++ +   N  +  A A L+ A+          +P V +       + + +LG
Sbjct: 58  DDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTS-------RASSDLG 110

Query: 138 -GNSPGVQGNGTVISTTANPSAQEGGTAPFNAPVIYNFHTAQLTVGYTPDVFGGNRRQVE 196
            G  PG         TT   +++               +   L + +  D+FG  +RQ+E
Sbjct: 111 KGQIPG--------QTTERVNSER--------------YDLGLDMAWELDLFGRIQRQIE 148

Query: 197 ALEAQATYQQLQLEATYLTLAANVAAA--AIQEALLRQQIASTREIVELNTQ--SVALLN 252
           A EAQ       L+   ++L A +  A   ++ A LR++IA    +  L TQ  S  +  
Sbjct: 149 ASEAQEAVAAADLQQLQVSLIAELVDAYGQLRGAQLREKIA----LANLKTQQESRTITE 204

Query: 253 RQLKAGYASRLDLALQENALAQASQLLPPLEKQFEQNRNLLRALTGGVQDVELPQTFDLA 312
               AG  + LD+   +  LA     +P L+ +  + R+ +  L G   D     + DL+
Sbjct: 205 TLRDAGVGNDLDVVRADARLAGVEATVPQLQAEQARARHRIATLLGQRPDA---LSVDLS 261

Query: 313 SLQLP---ESLPLSLPSQVVAQRPDVRAAEEQVHAASAQVGVAIAARLPQFSIDATWGGA 369
              LP   ++LP+  P +++ +RPD+R+AE Q+ AA+A VGVA A   P+ S+    G  
Sbjct: 262 PKALPAIAKALPVGDPGELLRRRPDIRSAERQLAAATANVGVATADLFPRVSLSGFLGFT 321

Query: 370 ASQFSQMFLNSGRFFSLTGNIAQPLFDAGVLKSRQRAAEEALKQAQAQYRATAITAFQNV 429
           A++ SQ+  ++   ++L  +I    FD G +++R R A+   + A A Y    + A +  
Sbjct: 322 AARGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGAKADAEGALANYEQQVLLALEES 381

Query: 430 ADTLQAIHSDARALRAAVELERTSRTSMELIGRQLSKGYVDRLALLTAQQNHHQATMALA 489
           A+         + L + +     SR + EL   +  +G VD L LL A++    A  A A
Sbjct: 382 ANAFSDYDKTQQRLLSLMRQSDASRKAAELASIRYREGTVDYLVLLDAERERLSAEDAQA 441

Query: 490 QAQAARLGDTAALFQALGGGW 510
           Q +        ++++ALGGGW
Sbjct: 442 QGEVDLYRGIVSIYKALGGGW 462