Pairwise Alignments

Query, 521 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  160 bits (405), Expect = 1e-43
 Identities = 139/499 (27%), Positives = 216/499 (43%), Gaps = 40/499 (8%)

Query: 21  LGGCAVGPDYARPALAASEGFSPKPLPEVTASAPVAAGGAQRFVRTQDIQAEWWKLFQSK 80
           LGGC++ PDY  P    +  +   P    T SA VAA            +  W + F   
Sbjct: 15  LGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAA-----------EQGWRQFFHDP 63

Query: 81  ALDAVIEKAFAANPTVESAQAALRIAQENVRAQRGFFYPTVQASYSPARTKIAGNLGGNS 140
           AL  +I+ +   N  +  A   L   +   R QR   +P V A+ S +R ++  N+  + 
Sbjct: 64  ALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANM--SQ 121

Query: 141 PGVQGNGTVISTTANPSAQEGGTAPFNAPVIYNFHTAQLTVGYTPDVFGGNRRQVE-ALE 199
            G  G  +  S T   SA                        Y  D+FG  R   E ALE
Sbjct: 122 TGESGITSQYSATLGVSA------------------------YELDLFGRVRSLTEQALE 157

Query: 200 AQATYQQLQLEATYLTLAANVAAAAIQEALLRQQIASTREIVELNTQSVALLNRQLKAGY 259
              + +Q +  +T + L A+VA A       +     T E ++   +S  L  R  + G 
Sbjct: 158 TYLSSEQAR-RSTQIALVASVANAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGV 216

Query: 260 ASRLDLALQENALAQASQLLPPLEKQFEQNRNLLRALTGGVQDVELPQTFDLASLQLPES 319
           AS LD++    A+  A       ++   Q+ N L  L G     +L +  +L + QL E 
Sbjct: 217 ASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPADLAKPLELDADQLAE- 275

Query: 320 LPLSLPSQVVAQRPDVRAAEEQVHAASAQVGVAIAARLPQFSIDATWGGAASQFSQMFLN 379
           +P  LPS ++ +RPD++ AE  + AA+A +G A AA  P  S+ A  G  +     +F  
Sbjct: 276 VPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSG 335

Query: 380 SGRFFSLTGNIAQPLFDAGVLKSRQRAAEEALKQAQAQYRATAITAFQNVADTLQAIHSD 439
               +     I  P+F+AG LK+    ++       A+Y  T  TAFQ V+D L A  + 
Sbjct: 336 GQGTWLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTF 395

Query: 440 ARALRAAVELERTSRTSMELIGRQLSKGYVDRLALLTAQQNHHQATMALAQAQAARLGDT 499
              L+A  +L + ++    L  R+   G    L  L AQ+N   A  AL   + ++L   
Sbjct: 396 EEQLQAQRDLVQANQDYYRLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSE 455

Query: 500 AALFQALGGGWWNRVAQAS 518
             L++ALGGGW+ +  QA+
Sbjct: 456 VNLYKALGGGWYEQTGQAN 474