Pairwise Alignments

Query, 521 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  163 bits (413), Expect = 1e-44
 Identities = 143/514 (27%), Positives = 220/514 (42%), Gaps = 50/514 (9%)

Query: 5   MARGLRTAVALACAVWLGGCAVGPDYARPALAASEGFSPKPLPEVTASAPVAAGGAQRFV 64
           M  GLR +  L  AV L GC +GPD+ RP   A + ++P    E  AS P A        
Sbjct: 1   MKPGLRLS-PLLLAVLLTGCTLGPDFQRPDSQAPQQWAPLQ-GEAAASQPQA-------- 50

Query: 65  RTQDIQAEWWKLFQSKALDAVIEKAFAANPTVESAQAALRIAQENVRAQRGFFYPTVQ-- 122
             + ++  WW+ F    L A+I++    N  ++ A A L  ++           P+V   
Sbjct: 51  --EPLELRWWETFHDARLSALIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVN 108

Query: 123 ASYSPARTKIAGNLGGNSPGVQGNGTVISTTANPSAQEGGTAPFNAPVIYNFHTAQLTVG 182
           A YS AR    G                   ++PS + G  A       +N     L  G
Sbjct: 109 AGYSRARNSADG------------------LSDPSGKAGKEA-------FNLWQGDLVAG 143

Query: 183 YTPDVFGGNRRQVEALEAQATYQQLQLEATYLTLAANVAAAAIQEALLRQQIASTREIVE 242
           +  D++G  RRQVEA +A     +       L L +  A   IQ   ++  +  T++ + 
Sbjct: 144 WELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRAVQHTLDVTQDNLR 203

Query: 243 LNTQSVALLNRQLKAGYASRLDLALQENALAQASQLLPPLEKQFEQNRNLLRALTGGVQD 302
           +   S+ L   +   G A+RLD+A     +A     LP LE Q +   N L  L      
Sbjct: 204 VARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEAQRDDLINALSLLAA---- 259

Query: 303 VELPQTFDLASLQ---LP---ESLPLSLPSQVVAQRPDVRAAEEQVHAASAQVGVAIAAR 356
            E P++     LQ   LP   +   + LPS++  +RPD+R AE ++HAA+A +GVA A  
Sbjct: 260 -EPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARLHAATASIGVAKADF 318

Query: 357 LPQFSIDATWGGAASQFSQMFLNSGRFFSLTGNIAQPLFDAGVLKSRQRAAEEALKQAQA 416
            P   +  + G  A Q S       R F+    ++ P+F+ G LK      E   ++A  
Sbjct: 319 YPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLELREAQQQEAAL 378

Query: 417 QYRATAITAFQNVADTLQAIHSDARALRAAVELERTSRTSMELIGRQLSKGYVDRLALLT 476
            YR   + A+  + D L+  ++         E  R +R ++E   RQ  +G VD L +LT
Sbjct: 379 NYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVEGAVDFLNVLT 438

Query: 477 AQQNHHQATMALAQAQAARLGDTAALFQALGGGW 510
            Q     +      + AA       L++ALGGGW
Sbjct: 439 VQGALLASEEQWIDSSAAVSQALVGLYKALGGGW 472