Pairwise Alignments

Query, 884 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score =  247 bits (630), Expect = 2e-69
 Identities = 161/509 (31%), Positives = 253/509 (49%), Gaps = 34/509 (6%)

Query: 24  EALSQVHALDLDLLANSNAIDARALLGKGATVSMQT-ETGRRYLGGIVTSFGLAQEDARR 82
           E L+Q   L+L+L++  + ID   +L K A  ++ + +   R++ G+V++F   +    R
Sbjct: 28  ETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGLVSAFSQGETGFCR 87

Query: 83  SFYKMRLRPWLWLATRRSDFRVFQERTVPEIITAVLARYG---YPMEQKLRHSYRAWNYC 139
           + Y   + P L  A  RS++R+FQ++TVP+I+  +  R G   + ++   +H  R   +C
Sbjct: 88  TRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSSAQHQVR--EFC 145

Query: 140 VQYGEDDCSFIARLCEHEGIHFHFRHEADRHVLVFADDIAG----SHGPLP--------- 186
           VQ GE D  FI RL   EG  + F H A +H L+  D +      S G L          
Sbjct: 146 VQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALKAEDDEALWL 205

Query: 187 -----GGETVRYHPHEQSGMTGGPEPGERIHEWELVEEVRSGRHYRSHFDFEHPGADLSF 241
                G + V YH       +GG +    +      E+VR+ R  +  + F +P      
Sbjct: 206 DEDDVGPDKVLYH-----ASSGGDQARACLRRLRYCEQVRTARQVQRDYTFTNPAYRQEH 260

Query: 242 MRRASP-GHEHDDHELYEWPGNHVRHDDGETCARIRNEEQLSGRSRARGRSNLRELAPGH 300
             + S   H+  D+E +++PG + R   G+     R          A  + +   L  G 
Sbjct: 261 KAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEVQGDDVRLQTGL 320

Query: 301 TMRLTGHPRADQNRQYLLLGVSYHLRENLEASEGTGHAEGSFQRFAFDALPTS--CAWRP 358
           +  L GHPR D N  + ++ + +   +     E    AE    R+  DAL       WRP
Sbjct: 321 SFTLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQG-TRYVNDALLVQGMAEWRP 379

Query: 359 PRTTPKPRTDGPQTALVVGPAGEEIWTDRYGRVKVRFHWDRLGRHDEHASCWVRVSTSWA 418
                KPR DGP  A VVGP GEEI+ D +GRVKV F WDR  +++E +SCWV VS  WA
Sbjct: 380 APMA-KPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQGWA 438

Query: 419 GAAFGAAALPRIGQEVIVDFLNGDPDFPIITGRVHNADEMPAWQLPGQAHLSGIRSREPG 478
           G ++G+ A+PRIGQ+VIV ++NGDPD P+ITGR +  D++P + LP       I+S+   
Sbjct: 439 GGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQTHK 498

Query: 479 GGRSNHLALDDTNGKVQAQLRSDHQSSSL 507
           G   N L  +D  G+ +  + ++   +++
Sbjct: 499 GDGFNELRFEDELGRQEVFIHAERDQNNV 527