Pairwise Alignments

Query, 630 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

 Score =  209 bits (533), Expect = 2e-58
 Identities = 145/461 (31%), Positives = 234/461 (50%), Gaps = 40/461 (8%)

Query: 189 DRLGAGEDASVVVEGTSEVRHLQHGFNQAARALAESHRLLQSRINEATAELARKNQQL-- 246
           +RL +GE   + V     +R +    N  A+AL ++++ L+ R+ E TAEL   N QL  
Sbjct: 188 NRLASGEVVGIFVL----IRDITERRN-TAQALHQAYQHLEQRVRERTAELTSLNDQLLR 242

Query: 247 -------------------EVASQAKTRLLAAASHDLRQPLHALTLFSDGLANGETDPLK 287
                              E A+ +KT+ LAA SHDL QPL+A  LF+  L   +     
Sbjct: 243 EIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDEPQNA 302

Query: 288 LQRIGHIRECVDSLDRLFSELLNLSQLDAGVLQPQWADFPLDRLFDEISRNFRPVAEQQG 347
              + ++   ++ ++ L   L+++S+LDAGV++   A F L  L D ++  +  VA  +G
Sbjct: 303 AHLVRNVSNSLEDVENLLGTLVDISKLDAGVIKADVAPFALHELMDNLAAEYVQVARSEG 362

Query: 348 LRLVVRKTDVWVRCDYVMLSRILNNLVSNSLRHTIEGGVLIGARRRGKGVRIDVVDTGVG 407
           L L        VR D  +L+RIL NL+SN++R+T  G V++G RR   GVRI+V D+G+G
Sbjct: 363 LELHFVGCSAVVRSDIQLLARILRNLLSNAIRYTPSGRVVLGCRRLRGGVRIEVWDSGIG 422

Query: 408 IAPQHQARVFEEFYQVEPTGRQAARGARGMGLGLATVQRLADLLNTRVELSSKLHKGTCV 467
           IA +H   +F EF + +    Q     RG+GLGLA V+++A +L  R+ + S L KG+  
Sbjct: 423 IAEEHLQDMFLEFKRGDV---QRPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVF 479

Query: 468 RV---LVRSAPAALPAPALSAALAGIEEEESLANVRILVIDDERTILEGLAVVLANWGAE 524
            V   L  +AP A P+  +   +      E L   R+ V+D++  I  G+  +L  WG  
Sbjct: 480 AVEVPLSTTAPKAQPSQVICEPML-----ERLRGARVWVLDNDAAICAGMRTLLEGWGCR 534

Query: 525 VLPAQTRAEALALADGWAQPPDVVISDLLLQGGDNGLDVIAALERHPHGIGPGTARLLVT 584
           V+ A +  +     D +    D++I+D  L    NG+D +A +        P    L++T
Sbjct: 535 VVTALSEEDLARQVDNYHADADLLIADYHLDNDCNGVDAVARINARRAQPLPA---LMIT 591

Query: 585 GETKPDRLREVANAGITVLYKPVSPRVLRQAIQAQRAAAAA 625
                D  +++   G T+++KPV P  L+ A+    A+  A
Sbjct: 592 VNYSNDLKQQIRELGHTLMHKPVRPMKLKTAMSHLLASGLA 632



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 198 SVVVEGTSEVRHLQHGFNQAARALAESHRLLQSRINEATAELARKNQQLEVASQAKTRLL 257
           S V  G       QH        LAE  R     +N+A AEL   N+ L   S+A+ R  
Sbjct: 39  SGVTRGNDPYAAFQHSV-----VLAEQVRERTDALNQAMAELKAVNRLL---SEARQRAE 90

Query: 258 AAASHDLR 265
            A  H +R
Sbjct: 91  TAHQHQIR 98