Pairwise Alignments

Query, 442 a.a., T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain from Variovorax sp. SCN45

Subject, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

 Score =  117 bits (293), Expect = 5e-31
 Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 7/254 (2%)

Query: 13  ERTVIKPKPRTPGGAPSAPA----PAPFFGGADPTPAAEVGELGLLNPLVSAAGKLLVLI 68
           E+++    P     A +A A    P P + G    P  ++   G  N ++ AA  L  L+
Sbjct: 24  EKSLPNDAPAAAAAASTASAQEQKPEPAYQGYPADPEFQLRG-GCANLMLDAAAPLFGLV 82

Query: 69  GKLRNLAQPPSVPALRASTADAVNQFDANARRAGVSNESVLAARYVLCTALDEAVANTPW 128
            +LR L + P++  +       ++      R+ G     +LA  Y LC  +DEAV   PW
Sbjct: 83  MRLRTLDELPNIKDVHQQVRIQIDSIREEIRQHGYEPAQLLAYSYGLCLYIDEAVMERPW 142

Query: 129 GVQAGWNKQSLLVQFHNETWGGEKVFQLLAKLAQDVPTHRQLLELIYSVLALGFEGRYRV 188
           G  + W+ + LL  FH+ETWGGEK+F ++ +L Q+   ++ +LE +Y  L LG +G+Y +
Sbjct: 143 GKSSCWSHEPLLSIFHDETWGGEKIFTVITRLMQEPKRYQDVLEFMYFALCLGLKGKYAL 202

Query: 189 VDNGRAQLDSVRQRLADLIAKDRPPVEPELSPHWRGQGAGTVRLRESLPLW--VFAAGFA 246
              G   L+++  +L  +I + R P   E+   +        R+    P W  +  +  A
Sbjct: 203 APKGEETLNALIHQLHGIIRELRGPTPEEVCDPYTNVAPRNFRMSRIWPWWSPLVISAIA 262

Query: 247 LLLALAWFALRLTL 260
           + +A   ++ RL L
Sbjct: 263 MAVAYGIYSYRLHL 276