Pairwise Alignments

Query, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 3e-27
 Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 11/226 (4%)

Query: 30  ASGKLVVATGGEFPPFNYFEGK-KLTGFEIEIAEIVVKKMGLAIEWKTIGFDSLLAGLQQ 88
           A+ KL +     +PPFN  +    + GF+ +I + +  KM +     T  +D ++  L  
Sbjct: 23  AAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVECSVVTSDWDGIIPALNA 82

Query: 89  DRWDIVVSSHGITPERAKAVDFASPHYCSGSSIVSRDPA--IRGAADLTGKVVGVQTGS- 145
            ++D +VSS  IT ER +AVDF +P+Y +    ++            L GKV+G Q  + 
Sbjct: 83  KKFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFKTDKESLKGKVIGTQRATL 142

Query: 146 --TYLENVRKLTKPKEIKNFPQDRDVRTALATGRVDAWVTDKFVALAAVKSNPQANLKL- 202
             TYLE+        EIK +    +    L +GR+D  + DK+V    +KS   +N +  
Sbjct: 143 AGTYLED---NYPDVEIKLYDTQENAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFK 199

Query: 203 GDPLF-VERIAAAVGKGNTALAAAYDKALAEALADGSYAAVSNRYF 247
           G+P+   ++I  AV KG+T L    +KALAE  ADG+Y  ++++YF
Sbjct: 200 GEPVMDSDKIGIAVRKGDTKLRDDLNKALAEIKADGTYKKINDKYF 245