Pairwise Alignments

Query, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score =  134 bits (337), Expect = 2e-36
 Identities = 87/253 (34%), Positives = 136/253 (53%), Gaps = 10/253 (3%)

Query: 6   LLLASLLLTQVIFTASARPFPDIQASGKLVVATGGEFPPFNYF-EGKKLTGFEIEIAEIV 64
           LLL + LL+Q     +      IQ  G + V   G +PPF++  E  KLTGFE+E++E++
Sbjct: 15  LLLGAGLLSQAF---AGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELSELL 71

Query: 65  VKKMGLAIEWKTIGFDSLLAGLQQDRWDIVVSSHGITPERAKAVDFASPHYCSG-SSIVS 123
            K++G+  + +   +D +LA L+  R D+VV+   I+ ER K  DF+ P+  SG  +++ 
Sbjct: 72  AKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALIL 131

Query: 124 RDPA----IRGAADLTGKVVGVQTGSTYLENVRKLTKPKEIKNFPQDRDVRTALATGRVD 179
           +  A    I+GA DL GK VGV  G+ Y + V+K     +++ +  D      L  GR+D
Sbjct: 132 KKKAEQLNIKGAQDLAGKKVGVGLGTNYEQWVKKDVPQADVRTYEDDPSKFADLRNGRID 191

Query: 180 AWVTDKFVALAAVKSNPQANLKLGDPLFVERIAAAVGKGNTALAAAYDKALAEALADGSY 239
           A + D+  AL   +      L  GD         A+ KG   L AA +KA+ +  ADG+ 
Sbjct: 192 AILIDRLAALEYAQKAKDTEL-AGDAFSRLESGVALRKGEPELLAAINKAIDKLKADGTL 250

Query: 240 AAVSNRYFGEDVS 252
           A +S +YFG DV+
Sbjct: 251 AKLSEKYFGADVT 263