Pairwise Alignments

Query, 254 a.a., Transcriptional regulator, GntR family from Variovorax sp. SCN45

Subject, 243 a.a., HTH-type transcriptional repressor RspR from Xanthobacter sp. DMC5

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 3/220 (1%)

Query: 11  SDTSPAAAAAPDDGAAPADKQSSIESIANDIATAIVEKRLPPGTWLREEALGRVYSVSRT 70
           S+  P   A  D     A        +A+ +  AI   R  PG  L E+ L  +  VSR 
Sbjct: 12  SELKPEVVAKMDSMRVAAIAAPVRTQVADMLRQAITTGRFEPGRRLIEKELCELLGVSRP 71

Query: 71  KVRAALLMLSKDKLIEMIPDKGAFVCQPTVEEAREVFAVRRILESEVVRLFIANARPRDY 130
            VR AL  L  + LI   P++G  V +  +++A  ++ +R +LE+   +LF  NA   + 
Sbjct: 72  SVREALRELEAEGLIHTFPNRGPVVAKLEIKDAVGIYQIRGVLEALAAKLFCENATDEEI 131

Query: 131 QVLEQHIKFERTALRQTTTTGTVREKLLGDFHVALAEATGNRTLAELVRELVARSSLIAM 190
             LEQ +     A R       +  K    F+  L +   N  +   +R +  R   +  
Sbjct: 132 ATLEQKVGLLAEAYRGGELDAIISAK--AKFYEVLLKGAANPLIPNFLRVINGRIIQLRR 189

Query: 191 LYHSSNDPHCSSDEHAE-FLRLCRKGDPEAAVTSMIEHLE 229
           +   S     SS +  E  +   ++ D +AA  + +EH+E
Sbjct: 190 ISLMSEQRMQSSIKEIERIMAAIKRRDRDAAFAATLEHIE 229