Pairwise Alignments

Query, 496 a.a., Unknown substrate:proton symporter from Variovorax sp. SCN45

Subject, 466 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  166 bits (420), Expect = 2e-45
 Identities = 129/486 (26%), Positives = 222/486 (45%), Gaps = 50/486 (10%)

Query: 10  VHPVDQRLPSGKLAALGLQHVLVMYAGAVAVPLIVGRALKLTPDEVALLISADLFCCGIA 69
           +  ++ R P  +     + H+L ++   V   LIVG AL+L+ +  A L+S  +   GI 
Sbjct: 12  IFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYLVSMAMIASGIG 71

Query: 70  TLIQALGATQWFGIKLPVMMGVTFASVAPMVAIANANPGQN-GAQLLFGSIIGAGVVSIL 128
           T +Q +      G  L  +  V F+ V  M+A+ ++        +L+  S++G   V   
Sbjct: 72  TWLQ-VNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSSLLGVSFVGAF 130

Query: 129 IAPLVSRML----RFFPPVVTGTIIAVIGISLMRVGINWIFGNPVGPTAPALVDPVYAKW 184
           +    S +L    R   P V+G ++ +IG+SL++VGI    G                  
Sbjct: 131 LVVGSSFILPYLRRVITPTVSGIVVLMIGLSLIKVGIIDFGG------------------ 172

Query: 185 LAEVTSPGSSIPAVPKGFAIMPTVPNPKYADLSGFGVATLVLVSILLIVKYAKGFVANIS 244
                           GFA   +     Y  L   GV  LVL+ ++         +    
Sbjct: 173 ----------------GFAAKSSGTFGNYEHL---GVGLLVLIVVIGFNCCRSPLLRMGG 213

Query: 245 VLLGIVIGAVVASITGLMTYEKVGKAAWVDIVLPFHFGMPQFDPILILTMTLIMIVVMIE 304
           + +G+ +G + +   G++ +  +     + I  PF +G   F     L +  I ++ ++E
Sbjct: 214 IAIGLCVGYIASLCLGMVDFSSMRNLPLITIPHPFKYGF-SFSFHQFLVVGTIYLLSVLE 272

Query: 305 STGMFLALGEMTGRKID----QKDLARGLRTDGLGTLIGGVFNTFPYTSFSQNVGLVAVT 360
           + G   A   ++ R I     Q  L  G+  DGL ++I     + P T+F+QN G++ +T
Sbjct: 273 AVGDITATAMVSRRPIQGEEYQSRLKGGVLADGLVSVIASAVGSLPLTTFAQNNGVIQMT 332

Query: 361 GIRSRYVCVAGGVILIVLGLLPKMAALVESLPTVVLGGAGLVMFGMVAATGIRILSGVDF 420
           G+ SRYV     V+L++LGL P +     ++P+ VLGGA  +MF M+A  GIRI+     
Sbjct: 333 GVASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIAGIRIIITNGL 392

Query: 421 KNNRHNAMIVAVSIGIGMIPLIAPNFKQWMPHAIHSLIESGILLASIAAVLLNLFLNGAK 480
           K  R   +IVA S+G+G+     P   + +P +I+ L+E+ I    + A+LLN+ L G  
Sbjct: 393 K--RRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGY 450

Query: 481 HDEQAV 486
             E  +
Sbjct: 451 RQENVL 456