Pairwise Alignments

Query, 334 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 304 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 76.3 bits (186), Expect = 9e-19
 Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 22/288 (7%)

Query: 1   MNFTFKQLEAFLFSAKLQSFSAAAVKLHTTQSAISKRLAELEESLGGPLLHRTSHGLELA 60
           M  T ++L  F+   +  SFS AA +L    SA+S+ + +LE  LG  LL+RT+  L L 
Sbjct: 1   MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLT 60

Query: 61  QAG----RELLSLAEEAQRLWQRIQHDISVDKTLRGTFRVGVTELIAMTWLTSLIQLLQK 116
           + G    R + S+ +E       I   +    T RG  R+     + + +L  LI+  ++
Sbjct: 61  EEGERYFRRVQSILQEMAAAESEI---METRNTPRGLLRIDAATPVVLHFLMPLIKPFRE 117

Query: 117 LHPEVTLEPVVDAGLTLFERLEANKLDLSIMPGIFWGQAFESIKVGQVDQAWIASP---- 172
            +PEVTL  V  +  T+   +E  K+D++I  G     +  +  +    +  IASP    
Sbjct: 118 RYPEVTLSLV--SSETIINLIE-RKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYIS 174

Query: 173 RLGVPNRA--LKPHEFADYPVIEQPAGASKNRFYEAWRAEHGFRFGKVMLTNSTTVLREL 230
           R G P     LK H    +    +PA  +      +    H  ++G  + +NS   L++L
Sbjct: 175 RYGKPETIDDLKQHICLGF---TEPASLNTWPIARSDGQLHEVKYG--LSSNSGETLKQL 229

Query: 231 TISGFGISQQALDYVRPDIKSG-LLRIVRTDPMPPPLVYSAVYRRDNA 277
            +SG GI+  +   +  +I  G L+ ++    +P  + +SAVY  D A
Sbjct: 230 CLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRA 277