Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  228 bits (582), Expect = 1e-64
 Identities = 111/309 (35%), Positives = 196/309 (63%)

Query: 4   FLLKRTLTLIGTLVGASIIVFLVLEILPGNAAQMLMGPDASPEAVAALATKLGLDLPAWT 63
           F+L++    + TL+  S++VF ++ ++PG+ A +++G  A P+++A +   LGLD    T
Sbjct: 4   FILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHSLVT 63

Query: 64  RYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTAAAR 123
           ++  W   +L+ +LG S +    VL LIL+R +++  + L+A+ F T+IA+ +G+ AA +
Sbjct: 64  QFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIAAWK 123

Query: 124 HNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFSGVKSLLL 183
            N   D+GL+ +A + ++IP+FW  +LL+  F ++L W    G+  +    +  +  ++L
Sbjct: 124 QNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMSYMVL 183

Query: 184 PALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVITVM 243
           P ++L +V+   + R+ R++ +EV+R +++  ARAKG+S+R VLW H L NA  P  T++
Sbjct: 184 PVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTWTLV 243

Query: 244 GMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMLLAAMVVIVNFVVDVL 303
           G+    LL G  V+E VF LPG+GRL+  AI  RD  V++ C++L+  + V+VN  VD+L
Sbjct: 244 GLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCVDLL 303

Query: 304 YAVIDPRIK 312
           Y + DPR+K
Sbjct: 304 YPLFDPRVK 312