Pairwise Alignments

Query, 293 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  207 bits (528), Expect = 2e-58
 Identities = 115/293 (39%), Positives = 168/293 (57%), Gaps = 4/293 (1%)

Query: 1   MNAITAPAPSAAALKLPGFWQRAVKHRSFVIGGVLAALLLIAALVSFVWTPWSPYAMDMA 60
           M  +TAP  S    K    WQ   ++R   IG  L  ++++ AL + +  P+ P   ++A
Sbjct: 1   MTTLTAPLVS----KPTTLWQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIA 56

Query: 61  NKMQAPTGSHWLGTDAFGRDVASLLLVGARASILVGIIAVGIGLVVGTALGLLAAAKRGW 120
            +++ P+   WLGTD +GRDV S L+ G R S+LVG +AV I +VVG+ALG++A    G 
Sbjct: 57  YRLEPPSAEFWLGTDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGI 116

Query: 121 VEEAVMRLSDFTLAFPAILSAIMMTAVFGAGIVNAIVAIGIYNIPTFARITRASANAIWS 180
            +  +    D  L+FP +L  +M+ A+ GA + N I+AI I  I  F RI RA   A+  
Sbjct: 117 TDRLITGFVDVLLSFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQ 176

Query: 181 REYVAAARACGKGSFAITMQHVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQP 240
           R++V A R+ G G   +   H+LPN+ + ++V   +  A AI  EA+LS++GLG  PP P
Sbjct: 177 RDFVEAGRSLGYGPGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAP 236

Query: 241 SWGRMLSEAQTLMFQQPLLAVFPGMAIALAVLGLNLLGDGLRDLLDPRLARAR 293
           +WG M+ E    +     L VFP +AI L VL L+LLGD LRD  DP+    R
Sbjct: 237 TWGSMIREGFENILDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTRSER 289