Pairwise Alignments

Query, 293 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  187 bits (475), Expect = 2e-52
 Identities = 93/259 (35%), Positives = 147/259 (56%), Gaps = 4/259 (1%)

Query: 34  VLAALLLIAALVSFVWTPW----SPYAMDMANKMQAPTGSHWLGTDAFGRDVASLLLVGA 89
           V  A++++  L+  +++PW     P A+D+  ++  P+ +HW GTD  GRD+ S +LVG+
Sbjct: 34  VTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGS 93

Query: 90  RASILVGIIAVGIGLVVGTALGLLAAAKRGWVEEAVMRLSDFTLAFPAILSAIMMTAVFG 149
           + SIL G++ V I  ++G+ LG L+    G  +  +MR+ D  L+ P+++  + + A  G
Sbjct: 94  QQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALG 153

Query: 150 AGIVNAIVAIGIYNIPTFARITRASANAIWSREYVAAARACGKGSFAITMQHVLPNISAV 209
             + NA++AI I  IP + R+ R  A  +    YV AA+  G   + +   H+L N    
Sbjct: 154 PSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPP 213

Query: 210 LIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTLMFQQPLLAVFPGMAIAL 269
           LIVQ ++    AIL  A L ++GLG Q P   WG M++  +  +  Q     FPG AI L
Sbjct: 214 LIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILL 273

Query: 270 AVLGLNLLGDGLRDLLDPR 288
             +G NL GDG+RDLLDP+
Sbjct: 274 TAVGFNLFGDGIRDLLDPK 292