Pairwise Alignments

Query, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 531 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

 Score =  130 bits (328), Expect = 9e-35
 Identities = 137/456 (30%), Positives = 203/456 (44%), Gaps = 43/456 (9%)

Query: 2   LKRRT----LMTSAMAAAIPGVFLPQARAQAGKNTLTIGMPLEPP---GLDPTTGAASAI 54
           L RRT    L   A+  AIPG+   Q     G  T  I    EP     L   TG A   
Sbjct: 4   LSRRTFNAALGIGALGTAIPGISFAQTTPVRG-GTARIVAASEPAMLIELFQNTGNAGVG 62

Query: 55  AEITQYNIFETLTKVNADGSVTPMLAESWSSSPDMKTFVFKLRKGVRFENDQPFNAHTVK 114
           + +      E L KV+ D +  P LAESW  S D KT+ F LR G+++ + QPF +  V 
Sbjct: 63  SRV-----IEGLLKVSFDRTFKPHLAESWDISADGKTYTFHLRPGIKWHDGQPFTSADVA 117

Query: 115 FSFDRAGGAKSTNKDKRF-FSEIGTV-VLDEYTVGVNSTLPNPD-LPFMLGQSTACIVEP 171
           FS       K T+  +R  F+ +  +   D  TV      P P  LP + G ++  I + 
Sbjct: 118 FSLLT---LKETHPRRRVTFASLEKIDTPDPLTVVAQFKTPVPFLLPALSGIASPIIPKH 174

Query: 172 KSADTNATA------PVGTGPYKLSAWQRGASCTLVKSPSYRDQNLAKVPKFVFRFMSDT 225
              +T+  A      P+GTGPY    W+RG+   L ++P Y  ++L  +   V RF+ D 
Sbjct: 175 LYEETDIRANPYNAKPIGTGPYVFKEWERGSHILLERNPDYWIKDLPLLDAVVTRFIVDV 234

Query: 226 AAQTAALMANDIDI--FPRAGTRSVAQFKGNPRFQVIEVG--TRGKVILTINNRKKP-LD 280
           +A+ AA  A D+D+          + +   +PRF V   G    G +         P L 
Sbjct: 235 SARGAAFEAGDVDVGYHTPVPLDEIKRLGDDPRFGVETRGYELEGSLNQLFFRLDHPILS 294

Query: 281 DVRVRRAILAAIDRNAIIQGAADGFGKPIGSHYAMGAPGFVD-TTAMNPFDIEKAKKLLA 339
           D+RVR+A   AI+ +  I+    G+  P  +  A     + D +     FD  KA+ LL 
Sbjct: 295 DLRVRQAFAHAINIDDYIRLVWKGYAVPSPTAIAPSMAEYHDPSIGFYAFDKAKAEALLD 354

Query: 340 EAGVK-----TPLELRLQLPPP-SYARQGGEMIAAQLAQIGINVKIQNVEWAQWLSGTF- 392
           EAG K         LRL   P     R G E + +    IG++V IQ+ ++A ++   + 
Sbjct: 355 EAGHKRGGDGKRFALRLTYNPVYGPTRVGAEFLRSAFGDIGVDVAIQSYDYATYIKSVYT 414

Query: 393 GGAHDFDLTMVAH-VEPFDLVKYTEADYYWGYDSKK 427
             A D DL  +A+  +P D ++      YW  + KK
Sbjct: 415 DAAFDIDLQHLANGYDPTDGIQRG----YWSKNIKK 446