Pairwise Alignments

Query, 881 a.a., DNA gyrase subunit A (EC 5.99.1.3) from Variovorax sp. SCN45

Subject, 758 a.a., DNA topoisomerase IV subunit A from Dickeya dianthicola ME23

 Score =  360 bits (923), Expect = e-103
 Identities = 260/790 (32%), Positives = 400/790 (50%), Gaps = 85/790 (10%)

Query: 11  ISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWNRPYKKSARIV 70
           ++L     ++YL+Y+M VI+ RALP   DGLKPV RR+++AM EL    +  +KKSAR V
Sbjct: 12  LALHTFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLSASAKFKKSARTV 71

Query: 71  GDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNA-AAMRYTEIRLAK 129
           GDV+GKYHPHGD + Y+ +V +AQ FS R+ LVDGQGN+G+ D   + AAMRYTE RL+K
Sbjct: 72  GDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSK 131

Query: 130 IAHEMLADIDKETVDFQDNYDGSEKEPKVLPSQLPNLLVNGSGGIAVGMATNIPPHNLNE 189
            A  +L ++ + TVD+  N+DG+ +EPK+LP++LPN+L+NG+ GIAVGMAT+IPPHN+ E
Sbjct: 132 YAEVLLGELGQGTVDYVPNFDGTMQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNVRE 191

Query: 190 VVDACLYLLRNPEASIDELMEIVPAPDFPT-AGIIYGINGVKDGYRTGRGKVVMRAKCHF 248
           V  A + L+  P+  +D L+  V  PDFPT A II   + ++  Y +GRG V MRA    
Sbjct: 192 VAAAAMALIDEPDTQLDALLRHVQGPDFPTEAEIITPRDEIRKMYESGRGSVRMRAVWKK 251

Query: 249 EDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESD-KSGMRLVIEL 307
           ED       ++++  LP+QV+   + E++A  +  KK+  +  ++DESD ++  RLV+  
Sbjct: 252 ED------GSVVITALPHQVSGARVLEQIASQMRAKKLPMLDDLRDESDHENPTRLVLVP 305

Query: 308 KRGEVP-EVVLNNLYKQTQLQDTFGINMVAL-VDGQPKLCNLKDLIQVFLQHRREVVTRR 365
           +   +  + V+N+L+  T L+ ++ INM  + +DG+P +  L++++  +L  RR+ V RR
Sbjct: 306 RSNRIDFDQVMNHLFATTDLEKSYRINMNMIGLDGRPSVKGLREILTEWLAFRRDTVRRR 365

Query: 366 TVFNLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRSWDSKLVREMLT 425
             F L K  +R H+LEGL +A  NID+ I IIR    P   K  LM +            
Sbjct: 366 LNFRLDKVLKRLHILEGLLIAFLNIDDVIHIIRNEDEP---KPVLMAK------------ 410

Query: 426 RSRADGGVINADDYRPEGLEREYGMGGDGLYRLSDTQAQEILQMRLQRLTGLEQDKIVAE 485
                                         + LSDTQA+ IL+++L+ L  LE+ KI  E
Sbjct: 411 ------------------------------FGLSDTQAEAILELKLRHLAKLEEMKIRGE 440

Query: 486 YKDVMAEIDDLLDILAKPERVSTIIGEELGTIKQEFGQSKIGARRSLVEH-SAYDLSTED 544
             D+  E D L  +LA   +++T++ +E+    + +G  +   R  L E   A  +S  D
Sbjct: 441 QDDLAKERDQLQALLASERKMNTLLKKEIQEDAKAYGDER---RSPLHERGEAKAMSEHD 497

Query: 545 LITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATATKDDDWIDQLFIANTHDYILC 604
           L     + + LS  G++        R+ K         + K  D         ++  ++ 
Sbjct: 498 LSPSEPVTIVLSEMGWV--------RSAKGHDIDPSGLSYKAGDAYRAAARGKSNQPVVF 549

Query: 605 FSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ--YV 662
             + GR Y L    +P+ +RG +G P+     L  G  I   L     +R   A    Y 
Sbjct: 550 MDSTGRSYALDPLTLPS-ARG-QGEPLTGKLTLPPGATIEQVLMAADNQRLLLASDAGYG 607

Query: 663 FMATSMGTVKKTALDEFNNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDGGKAVRF 722
           F+ T    V +         R G  +    D    L    L      ++  +  G+ + F
Sbjct: 608 FICTFADLVARN--------RVGKAVLTLPDHSRVLAPLELQRDDDLLLTVTAAGRMLLF 659

Query: 723 DEEDVRPL----GRNARGVRGMSLEAGQGVIAMLVAEDEQQSV-LTATENGYGKRTSITE 777
              D+  L    G     +    L +G   I  L+A     SV L A +  Y  R    +
Sbjct: 660 PVADLPELSKGKGNKIVSIPAAQLASGDDRILWLMAISPHSSVTLYAGKRKYSLRPEELQ 719

Query: 778 YTRHGRGTKG 787
             +  RG KG
Sbjct: 720 KYQASRGCKG 729