Pairwise Alignments

Query, 982 a.a., Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B from Variovorax sp. SCN45

Subject, 617 a.a., NADH:ubiquinone oxidoreductase, membrane subunit L from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 9e-62
 Identities = 178/551 (32%), Positives = 268/551 (48%), Gaps = 55/551 (9%)

Query: 1   MPLVFLV-ALPFIASVLAALMPSNARNRESTLAGLVALGCAIQTA----WLFPQIA-HGN 54
           M L+FL    P I  +L +          S L G+ ++G +  TA    W F      G 
Sbjct: 1   MNLLFLTFVFPLIGFLLLSFSRGRFSENLSALIGVGSVGLSAATAAYVIWQFNVAPPEGG 60

Query: 55  VLRQEI-QWLPALGL--NLVFRMDGFAWLFCMLVLGIGALVVLYARYYMSASDPVPRFFS 111
              Q + QW+   G   N    +DG +     +V G+G L+ L+A +YM       RFFS
Sbjct: 61  AYSQLLWQWMSVDGFAPNFTLYLDGLSVTMLGVVTGVGFLIHLFASWYMRGEAGYSRFFS 120

Query: 112 FFLAFMGAMMGVVLSGNLIQMVLFWELTSLFSFLLIGYWHHRRDARRGARMALTVTGAGG 171
           +   F+ +M+ ++L  NL+ +   WE   L S+LLIG+++  R+    A  A  VT  G 
Sbjct: 121 YTNLFIASMLFLILGDNLLFIYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGD 180

Query: 172 LCLLAGVLVLGRIVGSYELD--VVLASGDLIRAHALYPVALVLILLGAFTKSAQFPFHFW 229
           + +  G+ +L   +G+  +   +VLA            +A +++L GA  KSAQ P   W
Sbjct: 181 VFMAIGLFILFAQLGTLNVQELLVLAPQKFQAGDTWMVLATLMLLGGAVGKSAQLPLQTW 240

Query: 230 LPRAMAAPTPVSAYLHSATMVKLGVFLMARLWPVLSGTEQWFWLVGGAGAITLLLGGFIA 289
           L  AMA PTPVSA +H+ATMV  GV+L+AR   +         LVG  G +TL+L GF A
Sbjct: 241 LADAMAGPTPVSALIHAATMVTAGVYLIARTNGLFLLAPDILHLVGVVGGLTLVLAGFAA 300

Query: 290 MFQRDLKALLAYSTISHLGLITLLLGLNSPLAAVAAVFHVMNHATFKASLFMAAGII--- 346
           + Q D+K +LAYST+S +G + L LG+    A  AA+FH+M HA FKA LF+A+G +   
Sbjct: 301 LVQTDIKRILAYSTMSQIGYMFLALGVG---AWDAAIFHLMTHAFFKALLFLASGAVIVA 357

Query: 347 -DHETGTRDIRKLSGLMRLMPITGTLAIIASASMAGVPLLN-GFLSKEMFFAETVFIQAT 404
             HE   ++I K+ GL + +P+     ++  A++A +P++  GF SK+    E      T
Sbjct: 358 CHHE---QNIFKMGGLWKKLPLAYASFVVGGAALAALPIVTVGFYSKDEILWEAFASGNT 414

Query: 405 PWVDFSLPVIATIAGIFSVAYSARFVFDVFFGPPCGDEVPKHP-HEPPHWMRVPVELLVL 463
                 L     +    +  Y+ R +F  F G     +   H  H   HW+  P+ +L++
Sbjct: 415 -----GLLYAGLVGAFMTSLYTFRLIFIAFHGEA---KTEAHAGHGISHWL--PLGVLIV 464

Query: 464 LCLVVGVAPAWSVGPMLAAAATPVVGGTLPEYSLAVWHG-----FNLPLLMSFVALAG-- 516
           L   VG   AW          TP + G LPE   +  H        L +    +A+AG  
Sbjct: 465 LSTFVG---AW---------ITPPLAGVLPE---SAGHAGGEAKHALEITSGAIAIAGIL 509

Query: 517 GAALYLLQRRR 527
            AAL  L +RR
Sbjct: 510 LAALLFLGKRR 520