Pairwise Alignments

Query, 334 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 338 a.a., Taurine-binding periplasmic protein from Xanthobacter sp. DMC5

 Score = 51.2 bits (121), Expect = 4e-11
 Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 29/202 (14%)

Query: 49  KAKGWYSEAGIDLS-IEAGKGS----AVSAQRVGTGGSTLGISDLPTTIQAKGKGADVKA 103
           KA G + ++G+ +  ++ G G     AV+A +V  GG    + + P TI A  +    K 
Sbjct: 48  KALGLHEKSGVPIKWVKFGSGGDMNRAVAANQVDFGG----VGNPPFTIGAT-RALPYKG 102

Query: 104 VMVIYANSPQGFYWLKSSG-INGPKDFAGRKIGNPPGDAARLMWPAFAKKAGLDPASVTF 162
           + V+    P     ++S   I   KD AG+    P G     ++ A  K+AG++P  V  
Sbjct: 103 IFVLNMLGPVESLAVRSDKKIKSLKDLAGKTAAAPFGSTTHYLFIAALKEAGVNPTDVKL 162

Query: 163 VNVSPQAKVAALKSKSVDIISDFYNEHDLKAREFG---------ADLGFQAWRDAGVNVY 213
           +++SP   VAA   K +D    +    D   +  G         A  G+  W D GV   
Sbjct: 163 IDLSPSDAVAAWLRKDIDAAWIWEPNLDKIVKNGGEIFLTSGEMAKRGYPTW-DVGV--- 218

Query: 214 GNSLIVNGPYLAKNPAQVKKFV 235
                V   + AK P QV  +V
Sbjct: 219 -----VMNDFAAKYPDQVVAYV 235