Pairwise Alignments

Query, 288 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  101 bits (251), Expect = 2e-26
 Identities = 78/257 (30%), Positives = 124/257 (48%), Gaps = 14/257 (5%)

Query: 31  KTTASGERPEWHRWAIVVAVHIAGIALWELVVRVFAIQPFILPAPSKVLAT---LFNPNY 87
           + T+S        WA+ V +    +A+W+L V    +   ILPAPS V++    L     
Sbjct: 3   RATSSNLTQRLAPWALPVLL----LAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGE 58

Query: 88  SW--LKNTGVTAVEVFG-GYALGLVLGILCALLFITSRRLMLLAFPLLVTLNMIPKVAMG 144
            W  L  +G  A   F  G ++GLVLG +  L     R    L    +  +  +P +A+ 
Sbjct: 59  IWTHLAISGWRAGLGFVIGGSIGLVLGFITGLSNWGER----LLDSSVQMIRNVPHLALI 114

Query: 145 PLVIVWFSYGIGPNILITFSLCFFPILLTTIRGLNETEPELLDLVRALKGSRWQLFRYIQ 204
           PLVI+WF       I +      FPI L T  G+   +P L+++ R+   S + LFR + 
Sbjct: 115 PLVILWFGIDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVI 174

Query: 205 LPGSLPYVFSGMKVATILAVAGAVVGEFIASERGLGYLMIQVQASLDTPAVFMAVLLITG 264
           LPG+LP +  G++ A        +V E I++  G+GYL +  +  L T  V +A++L   
Sbjct: 175 LPGALPSILVGVRFALGFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAV 234

Query: 265 LGVLLYLLVLLLERLFI 281
           LG +  L    LER+++
Sbjct: 235 LGKIADLAARGLERVWL 251