Pairwise Alignments

Query, 380 a.a., Transcriptional activator of acetoin/glycerol metabolism from Variovorax sp. SCN45

Subject, 636 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 98/306 (32%), Positives = 135/306 (44%), Gaps = 42/306 (13%)

Query: 75  ERNRVLVEAARPVIERLSRAIADTRYFAILTDADGIVVDVGNLPDGTDAASRYARDIGRV 134
           ERNR+L++A  P ++ L  A        IL DA   V+ +              RD+   
Sbjct: 73  ERNRLLIDAVTPELDYLV-ARQGKAGIVILGDAQANVLAIEGQKHVLQREG--LRDL-HP 128

Query: 135 GVDLSESAIGTSAIGTALAEHESVWLHRGEHFFDDTSVYSCAGAPLFGPRGDCIGMLDLT 194
           G   SES  GT+AIGTA+ E     ++ GEH+ D  S +SC   PL  PRG+ IG+LD+T
Sbjct: 129 GSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGEVIGVLDIT 188

Query: 195 GVQVVERPELRHLAT--LSARSIENMLV-LREPCELLLRLAWPGSTASEATEGLLCIDGE 251
              V+ +P+   L+T  L+A +IE+ L  L  P +L+L         + A  GLL +  +
Sbjct: 189 REGVMAQPQ-DSLSTLMLAAGNIESRLFGLCHPDQLVLAFHSRPQYLNSAWHGLLALSLD 247

Query: 252 GYVTGANAAARQMLHQPLARNEHAL---HFNDLFALPLHMMFDAARRGDAMLEVPLWSGL 308
           G V  AN  A Q+L  P     H L      DL             R  A +   LW G 
Sbjct: 248 GEVLAANDGACQLLQVP----RHELIGRRSTDLL----------GERSPAFI-ARLWQGG 292

Query: 309 RVQVQPQRG------------GRGTPGLPAADVRPRLRDVETALIRKAVADAR--GNVAE 354
              VQ  +G            GR TP  P++  +P L     AL   A  D R   N+  
Sbjct: 293 VSSVQTAKGEFYFRALQLPRHGRVTPSTPSS--KPALSKQSPALDALAGGDQRLARNLRM 350

Query: 355 AARALG 360
           A + LG
Sbjct: 351 ARQGLG 356



 Score = 45.1 bits (105), Expect = 6e-09
 Identities = 24/38 (63%), Positives = 29/38 (76%)

Query: 333 LRDVETALIRKAVADARGNVAEAARALGISRATVYRKL 370
           L+D E   IR A+A  +GNV+ AA ALGISRAT+YRKL
Sbjct: 594 LKDSELEQIRGALARHQGNVSAAAAALGISRATLYRKL 631