Pairwise Alignments

Query, 380 a.a., Transcriptional activator of acetoin/glycerol metabolism from Variovorax sp. SCN45

Subject, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 13/235 (5%)

Query: 39  DSWISRSWQRCIEAGRRPQQRVSFDPVSQSAG--LDVAERNRVLVEAARPVIERLSRAIA 96
           D  I+RSW RC+E        V   PV    G  L+  ER   +++ A   +  L + ++
Sbjct: 27  DPSIARSWLRCLE-DYHLDPAVIEAPVVLEHGRLLESRERLHQVLQIADHEMNSLHQQLS 85

Query: 97  DTRYFAILTDADGIVVDVGNLPDGTDAASRYARDIGR-VGVDLSESAIGTSAIGTALAEH 155
              +  +LTDA G++++  + P    A  R     G  +G D SE+  GT+ IGT L E 
Sbjct: 86  GAGHAVLLTDARGVILNCVSAP----AERRSFERAGLWLGADWSEAREGTNGIGTCLVER 141

Query: 156 ESVWLHRGEHFFDDTSVYSCAGAPLFGPRGDCIGMLDLTGVQV-VERPELRH---LATLS 211
           +++ +H+ EHF    +  +C+ +P+F P GD + +LD++  +  V R    H   L  LS
Sbjct: 142 QALTIHQNEHFRGRHTGLTCSASPVFDPHGDLLAVLDVSSARPDVSRQSQFHTMALVNLS 201

Query: 212 ARSIENMLVLRE-PCELLLRLAWPGSTASEATEGLLCIDGEGYVTGANAAARQML 265
           A+ IE+   LR    + LLR      +    +EGLL  DG+G +  AN +A  +L
Sbjct: 202 AKMIESCYFLRHFEQQWLLRFHLQAESVGLFSEGLLAFDGDGRICAANQSALNLL 256



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 241 ATEGLLCIDGEGYVTGANAAARQMLHQPLARNEHA-LHFNDLFAL-----PLHMMFDAAR 294
           A + LL  +  G V       R +L   +A  E A + F DL A+     PL  + + A+
Sbjct: 531 ARQALLAFNWPGNVR----QMRNVLRTLVALCEDARITFADLPAVIRTSPPLAGVGEPAK 586

Query: 295 RGDAMLEVPLWSGLRVQVQPQRGGRGTPGLPAADVRPRLRDVETALIRKAVADARGNVAE 354
             D  +E    + +R Q +  R G        +     L D E   +++ +     ++  
Sbjct: 587 MSDQEMEGEGVALVRGQARSHRSGGAAEIEGESAGTEVLLDAERQALKEVLEAKHWHLTR 646

Query: 355 AARALGISRATVYRKL 370
            A  LGISR T+YRKL
Sbjct: 647 VAEHLGISRNTLYRKL 662