Pairwise Alignments

Query, 384 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 409 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  137 bits (345), Expect = 5e-37
 Identities = 103/325 (31%), Positives = 159/325 (48%), Gaps = 14/325 (4%)

Query: 7   FKPALLAFAAATAF--GAQAAD-IKIGVAAALSGGAAQYGSAIRNGFQLAADEINAAGGI 63
           F+  LLA  +A AF  GA AAD IKIGV    +GG++  G ++R+G +LAA+EIN +GG+
Sbjct: 3   FRFKLLALTSALAFSMGALAADPIKIGVDGPFTGGSSSMGVSMRDGVRLAAEEINKSGGV 62

Query: 64  NGDKIVLAVEDEQGKKEDAINVFKKLIFQDKVLMTFGPTLSNSAQAADPIAQAAKTVAFG 123
            G +I L   D++ K E  + + ++ + ++KV+   G   +  A A+    Q AK     
Sbjct: 63  LGRQIQLIERDDEAKNERGVQIAQEFVNKEKVVAAVGYINTGVALASQRFFQDAKIPVLN 122

Query: 124 TSNTADGITSIGD-----YVFRNSVTEADVLPETLRVAIKHANVKKVAVLYGNDDVFTKS 178
              T   IT   D     YVFRN+  ++   P  +  AI     KKVA+L  + + + + 
Sbjct: 123 NVATGSVITHQFDKDPENYVFRNAAHDSIQAPMIVEEAITRRGYKKVAILADSTN-YGQL 181

Query: 179 GYDNFKKALEDLKLPVTTTETFAKGDVDFKAQLTKIKATNPDAIVLSALLAEGAPIMVQA 238
           G ++ ++AL++  +     E F   DVD  AQL K K    +A++   +  E A I    
Sbjct: 182 GREDLERALKNKGITPVAVEKFNIKDVDMTAQLLKSKEAGAEAVLTYGIGPELAQIANGM 241

Query: 239 RQLGLNVPVIGGNGMNSTKIFDLAKGSSDNLYVGSPWSASNATPENTKFQKAYNDKFK-- 296
            +LG  VP+IG   +      D A    D   +   +      P+   F  A+  KFK  
Sbjct: 242 TKLGWKVPIIGSWTLAMANFIDNAGPGGDGARMPQTFIQEPTNPKRKAFIDAFVGKFKPK 301

Query: 297 ---MAPDQFAAQAYDGLYVVAQALK 318
              M     AAQ YD +Y++A A+K
Sbjct: 302 NNRMDSPVSAAQGYDSIYLLAAAIK 326