Pairwise Alignments

Query, 293 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  168 bits (426), Expect = 1e-46
 Identities = 101/294 (34%), Positives = 164/294 (55%), Gaps = 14/294 (4%)

Query: 4   QQLVNALSLGCVYALFALGFTLIFGVLGVINLSHGAVFMVGAYAAA------EFMRVSGM 57
           QQLVN L+LG VY L A+G+T+++G++G+IN +HG V+M+ AY AA       +  +   
Sbjct: 7   QQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESF 66

Query: 58  PLWV--GLPFAFAFCGVLGFLVDVLVLKPLRKRNAPHLIPMIATIGVAIILNNGIQGIFG 115
           PL +   L F     GV G++++ +  KPL  RN+  L P+I+ IG+++IL N  Q   G
Sbjct: 67  PLLILGTLIFTVVVTGVYGWVIERVAYKPL--RNSTRLAPLISAIGISLILQNYAQIAQG 124

Query: 116 AENLRFP---PGTIPDDALVFAGIHVTVLELGIVLASFVLMGVLMLSLQRTQLGRALRAI 172
           A+    P    G    D +    + +T  ++ I++A+F  M +L   ++ T+LGR  RA 
Sbjct: 125 AKQQGIPTLLAGAWRVD-IGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRAT 183

Query: 173 AESPKAAYLVGVNVEGLFYLTSFVAAGLGGVAGVLIGLYSNALFPLMGQPMLEKGIAVII 232
            +  K A ++G+N + +      + A +  +AGVLI L         G  +  K     +
Sbjct: 184 QQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAAV 243

Query: 233 LGGMGDIRGALLGGLFLGFAEVLSVAYVGSNMRDAVAFGLLFLVLLVRPKGLFG 286
           LGG+G + GA+LGG+ LG +E L    + S+ +D  +F LL ++L+ RP+GL G
Sbjct: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLG 297