Pairwise Alignments

Query, 293 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 8e-38
 Identities = 94/285 (32%), Positives = 150/285 (52%), Gaps = 10/285 (3%)

Query: 6   LVNALSLGCVYALFALGFTLIFGVLGVINLSHGAVFMVGAYAAAEFMRVSGMPLWVGLPF 65
           L+  L  G +Y+L A+GF LI+   GV N + GA+ +  A      +   G+P W+    
Sbjct: 8   LIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLE-RGVPFWLSFLV 66

Query: 66  AFAFCGVLGFLVDVLVLKPLRKRNAPHLIPMIATIGVAIILNNGIQGIFGAENLRFPPGT 125
             A    L  L++  VL+PL  R+   L   +AT+G+A I+    Q ++GA+ +      
Sbjct: 67  TLATMIALALLIERAVLRPLVGRSPITLF--MATLGLAYIIEGAAQALWGAQ-VHGLELA 123

Query: 126 IPDDALVFAGIHVTVLELGIVLASFVLMGVLMLSLQRTQLGRALRAIAESPKAAYLVGVN 185
           I D  L   G+ ++  +L     +  L+ +L L   RT++G ALRA+A+ P+AA  VG+ 
Sbjct: 124 ISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPRAAMSVGIR 183

Query: 186 VEGLFYLTSFVAAGLGGVAGVLIGLYSNALFPLMGQPMLEKGIAVIILGGMGDIRGALLG 245
           +  ++ +   VA  +G VAG+L G      F L    ++ K + V+I+GG   I GA++G
Sbjct: 184 LPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSL--SLVVLKALPVLIIGGFTSISGAIVG 241

Query: 246 GLFLGFAEVLSVAY----VGSNMRDAVAFGLLFLVLLVRPKGLFG 286
           GL +G +E L+  Y    +G  + +   + L  L LLVRP GLFG
Sbjct: 242 GLIIGASEKLAEVYFGPLIGGGIENWFPYVLALLFLLVRPAGLFG 286